Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14501 | Canola | mitochondrion, plasma membrane | 100.0 | 100.0 |
| CDY07761 | Canola | mitochondrion, plasma membrane | 97.09 | 97.4 |
| CDY18417 | Canola | plasma membrane | 94.82 | 96.07 |
| CDX91395 | Canola | mitochondrion, plasma membrane | 94.5 | 95.74 |
| CDX93341 | Canola | plasma membrane | 94.5 | 95.74 |
| CDX74925 | Canola | mitochondrion, plasma membrane | 94.17 | 95.1 |
| AT2G37940.1 | Thale cress | mitochondrion, plasma membrane | 93.53 | 94.75 |
| CDX76176 | Canola | mitochondrion | 84.14 | 86.09 |
| CDY13168 | Canola | mitochondrion, plasma membrane | 84.14 | 86.09 |
| Zm00001d046198_P001 | Maize | endoplasmic reticulum, plasma membrane | 11.97 | 77.08 |
| KRG88789 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 76.7 | 75.48 |
| CDY18431 | Canola | plasma membrane | 56.31 | 75.0 |
| VIT_08s0007g01510.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane | 76.7 | 75.0 |
| KRH75771 | Soybean | cytosol, golgi, mitochondrion, peroxisome | 76.05 | 74.84 |
| PGSC0003DMT400049398 | Potato | plasma membrane | 68.93 | 74.74 |
| KRH00099 | Soybean | golgi | 76.05 | 74.37 |
| PGSC0003DMT400028621 | Potato | cytosol, golgi, plasma membrane | 73.79 | 73.79 |
| KRH49241 | Soybean | mitochondrion | 75.08 | 73.19 |
| Solyc09g011740.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 74.11 | 72.47 |
| Solyc10g084990.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 72.82 | 72.12 |
| Solyc10g086690.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 68.28 | 72.01 |
| PGSC0003DMT400052472 | Potato | plasma membrane | 73.46 | 71.84 |
| GSMUA_Achr6P23620_001 | Banana | golgi | 69.9 | 69.01 |
| GSMUA_Achr3P17660_001 | Banana | cytosol, golgi, mitochondrion, plasma membrane | 69.9 | 68.79 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 70.23 | 68.67 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 69.58 | 68.47 |
| EES19630 | Sorghum | cytosol, golgi, plasma membrane | 69.58 | 67.4 |
| Zm00001d038343_P001 | Maize | plasma membrane | 69.26 | 67.08 |
| HORVU1Hr1G073040.1 | Barley | plasma membrane | 68.28 | 66.14 |
| HORVU1Hr1G073060.1 | Barley | plasma membrane | 68.28 | 66.14 |
| TraesCS3A01G365000.1 | Wheat | plasma membrane | 69.58 | 65.95 |
| TraesCS3B01G396900.1 | Wheat | golgi | 69.58 | 65.95 |
| EES01758 | Sorghum | mitochondrion | 68.93 | 65.74 |
| TraesCS3D01G358200.1 | Wheat | golgi | 69.26 | 65.64 |
| Os05t0287800-01 | Rice | mitochondrion | 66.34 | 65.5 |
| Os01t0850100-01 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 68.93 | 65.34 |
| TraesCS1D01G279500.1 | Wheat | plasma membrane | 67.64 | 64.91 |
| Zm00001d041608_P001 | Maize | mitochondrion, plasma membrane | 65.7 | 64.86 |
| Zm00001d012380_P002 | Maize | plasma membrane | 67.96 | 64.81 |
| Os05t0452900-02 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 67.96 | 64.62 |
| TraesCS1B01G289300.1 | Wheat | plasma membrane | 67.31 | 64.6 |
| KXG23698 | Sorghum | mitochondrion | 65.37 | 64.54 |
| Zm00001d030613_P003 | Maize | mitochondrion, plasma membrane | 65.05 | 64.22 |
| TraesCS1A01G280400.1 | Wheat | plasma membrane | 66.34 | 63.86 |
| Zm00001d042851_P003 | Maize | golgi, plasma membrane, plastid | 68.93 | 60.0 |
| HORVU3Hr1G085630.8 | Barley | plastid | 64.08 | 56.25 |
Protein Annotations
| EnsemblPlants:CDY69104 | EnsemblPlantsGene:GSBRNA2T00083062001 | GO:A0A078JQM6 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sphingomyelin_synth-like_dom | PANTHER:PTHR21290 | PANTHER:PTHR21290:SF33 | PFAM:PF14360 | ProteinID:CDY14501.1 | ProteinID:CDY69104 |
| ProteinID:CDY69104.1 | TMHMM:TMhelix | UniParc:UPI0004EDC415 | UniProt:A0A078JQM6 | MapMan:5.4.13.1 | : |
Description
BnaCnng61880DBnaC03g20940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQM6]
Coordinates
chrLK038659:-:2358..4456
Molecular Weight (calculated)
35534.7 Da
IEP (calculated)
9.609
GRAVY (calculated)
0.160
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLYIRRESS KLWRRFCSEI TTEIGLLAEN WKYLLAGLIL QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI
101: LKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVAR LPWPKSPLEV LEINPHGVMY GCGDLIFSSH MIFTLVFVLT YHKYGTKRFI
201: KLFGWLTAFV QSLLIIASRK HYTVDVVVAW YEYTVNLVVF CLDKKLPELP DRTTVLLPVV SKVRMKEENH KLLLNGNGVD PAADWRPRAQ VNGKIDSNGV
301: HTDNSLNGA
101: LKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVAR LPWPKSPLEV LEINPHGVMY GCGDLIFSSH MIFTLVFVLT YHKYGTKRFI
201: KLFGWLTAFV QSLLIIASRK HYTVDVVVAW YEYTVNLVVF CLDKKLPELP DRTTVLLPVV SKVRMKEENH KLLLNGNGVD PAADWRPRAQ VNGKIDSNGV
301: HTDNSLNGA
001: MPVYVDREAP KLWRRIYSEA TLEASLLAEK WKLVLAGLVF QYIHGLAAHG VHYLHRPGPT LQDAGFFILP ALGQDKAFFS ETVFVTIFGS FILWTFHPFV
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH
Arabidopsis Description
IPCS3Phosphatidylinositol:ceramide inositolphosphotransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y01]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.