Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88789 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 97.77 | 97.77 |
| VIT_08s0007g01510.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane | 85.67 | 85.13 |
| KRH00099 | Soybean | golgi | 84.71 | 84.18 |
| KRH49241 | Soybean | mitochondrion | 83.12 | 82.33 |
| PGSC0003DMT400028621 | Potato | cytosol, golgi, plasma membrane | 80.57 | 81.88 |
| Solyc10g084990.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 79.62 | 80.13 |
| PGSC0003DMT400049398 | Potato | plasma membrane | 72.61 | 80.0 |
| CDX76176 | Canola | mitochondrion | 76.75 | 79.8 |
| CDY13168 | Canola | mitochondrion, plasma membrane | 76.75 | 79.8 |
| Bra014848.1-P | Field mustard | mitochondrion | 76.11 | 79.14 |
| AT3G54020.1 | Thale cress | mitochondrion, plasma membrane | 76.11 | 78.36 |
| CDX91395 | Canola | mitochondrion, plasma membrane | 76.11 | 78.36 |
| Solyc09g011740.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 78.66 | 78.16 |
| AT2G37940.1 | Thale cress | mitochondrion, plasma membrane | 75.48 | 77.7 |
| Bra017148.1-P | Field mustard | plasma membrane | 75.16 | 77.38 |
| CDY18417 | Canola | plasma membrane | 75.16 | 77.38 |
| CDX93341 | Canola | plasma membrane | 75.16 | 77.38 |
| CDX74925 | Canola | mitochondrion, plasma membrane | 75.16 | 77.12 |
| PGSC0003DMT400052472 | Potato | plasma membrane | 77.39 | 76.9 |
| Solyc10g086690.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 71.66 | 76.79 |
| Bra000029.1-P | Field mustard | plasma membrane | 72.29 | 76.69 |
| CDY07761 | Canola | mitochondrion, plasma membrane | 75.16 | 76.62 |
| Bra005148.1-P | Field mustard | mitochondrion, plasma membrane | 73.89 | 76.57 |
| CDY14501 | Canola | mitochondrion, plasma membrane | 74.84 | 76.05 |
| CDY69104 | Canola | mitochondrion, plasma membrane | 74.84 | 76.05 |
| GSMUA_Achr6P23620_001 | Banana | golgi | 71.34 | 71.57 |
| GSMUA_Achr3P17660_001 | Banana | cytosol, golgi, mitochondrion, plasma membrane | 70.06 | 70.06 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 70.06 | 70.06 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 70.38 | 69.94 |
| HORVU1Hr1G073060.1 | Barley | plasma membrane | 70.7 | 69.59 |
| HORVU1Hr1G073040.1 | Barley | plasma membrane | 70.7 | 69.59 |
| Zm00001d038343_P001 | Maize | plasma membrane | 70.38 | 69.28 |
| Os05t0452900-02 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 71.66 | 69.23 |
| TraesCS1B01G289300.1 | Wheat | plasma membrane | 70.7 | 68.94 |
| EES19630 | Sorghum | cytosol, golgi, plasma membrane | 69.75 | 68.65 |
| TraesCS1D01G279500.1 | Wheat | plasma membrane | 70.38 | 68.63 |
| Os01t0850100-01 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 71.02 | 68.4 |
| EES01758 | Sorghum | mitochondrion | 70.38 | 68.21 |
| Zm00001d030613_P003 | Maize | mitochondrion, plasma membrane | 67.83 | 68.05 |
| Os05t0287800-01 | Rice | mitochondrion | 67.83 | 68.05 |
| Zm00001d012380_P002 | Maize | plasma membrane | 70.06 | 67.9 |
| TraesCS3B01G396900.1 | Wheat | golgi | 70.38 | 67.79 |
| TraesCS1A01G280400.1 | Wheat | plasma membrane | 69.11 | 67.6 |
| TraesCS3A01G365000.1 | Wheat | plasma membrane | 70.06 | 67.48 |
| TraesCS3D01G358200.1 | Wheat | golgi | 70.06 | 67.48 |
| KXG23698 | Sorghum | mitochondrion | 67.2 | 67.41 |
| Zm00001d041608_P001 | Maize | mitochondrion, plasma membrane | 66.56 | 66.77 |
| Zm00001d046198_P001 | Maize | endoplasmic reticulum, plasma membrane | 9.87 | 64.58 |
| Zm00001d042851_P003 | Maize | golgi, plasma membrane, plastid | 70.06 | 61.97 |
| CDY18431 | Canola | plasma membrane | 44.9 | 60.78 |
| HORVU3Hr1G085630.8 | Barley | plastid | 64.65 | 57.67 |
Protein Annotations
| EMBL:ACUP02000486 | EnsemblPlants:KRH75771 | EnsemblPlantsGene:GLYMA_01G108000 | EntrezGene:100814250 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Sphingomyelin_synth-like_dom | PANTHER:PTHR21290 | PANTHER:PTHR21290:SF33 | PFAM:PF14360 | ProteinID:KRH75771 |
| ProteinID:KRH75771.1 | TMHMM:TMhelix | UniParc:UPI0001B63EB2 | UniProt:A0A0R4J2K6 | MapMan:5.4.13.1 | : |
Description
hypothetical protein
Coordinates
chr1:-:36876572..36881321
Molecular Weight (calculated)
35646.6 Da
IEP (calculated)
9.517
GRAVY (calculated)
0.121
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFYIGREAS KLWKRICAET TTEINLLAEN WKYLLAGLVC QYIHGLAARG VHYLHRPGPT LQDVGFFLLP ELGQDKAYIS ETLFAMIFIS FVSWTFHPFI
101: LKNRKIYTVL IWCRVLAFLV GSQVLRIITF YSTQLPGPNY HCREGSKLAT LPRPDSVLEV LLINFPRGVV YGCGDLIFSS HMIFTLVFVL TYQKYGTRRS
201: LKQLGWLLAV VQSLLIVASR KHYTVDVVVA WYTVNLVVFF IDKKLPELPD RSIAAATLLP LSTKDKDSRT KEENHKLLNG NSGDPVDWRQ RTQVNGKIME
301: DGNTLHADSA MNGA
101: LKNRKIYTVL IWCRVLAFLV GSQVLRIITF YSTQLPGPNY HCREGSKLAT LPRPDSVLEV LLINFPRGVV YGCGDLIFSS HMIFTLVFVL TYQKYGTRRS
201: LKQLGWLLAV VQSLLIVASR KHYTVDVVVA WYTVNLVVFF IDKKLPELPD RSIAAATLLP LSTKDKDSRT KEENHKLLNG NSGDPVDWRQ RTQVNGKIME
301: DGNTLHADSA MNGA
001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
Arabidopsis Description
IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.