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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, mitochondrion, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH04597
KRH11076
KRH21197
KRH22653
KRH26664
KRH28456
KRH42923
KRH42926
KRH45251
KRH57934
KRH59035
KRH59036
KRH63322
KRH77015

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G54020.1 KRH04597 AT2G23420.1 21798944
AT3G54020.1 KRH28456 AT2G23420.1 21798944
AT3G54020.1 KRH57934 AT2G23420.1 21798944
AT3G54020.1 KRH63322 AT2G23420.1 21798944
AT3G54020.1 KRH77015 AT2G23420.1 21798944
AT3G54020.1 KRH11076 AT4G19030.1 21798944
AT3G54020.1 KRH21197 AT4G19030.1 21798944
AT3G54020.1 KRH42923 AT4G19030.1 21798944
AT3G54020.1 KRH42926 AT4G19030.1 21798944
AT3G54020.1 KRH45251 AT4G19030.1 21798944
AT3G54020.1 KRH59035 AT4G19030.1 21798944
AT3G54020.1 KRH59036 AT4G19030.1 21798944
AT3G54020.1 KRH22653 AT5G22290.1 21798944
AT3G54020.1 KRH26664 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH75771 Soybean cytosol, golgi, mitochondrion, peroxisome 97.77 97.77
VIT_08s0007g01510.t01 Wine grape cytosol, golgi, mitochondrion, plasma membrane 86.31 85.76
KRH00099 Soybean golgi 85.67 85.13
KRH49241 Soybean mitochondrion 84.08 83.28
PGSC0003DMT400028621 Potato cytosol, golgi, plasma membrane 80.57 81.88
CDX76176 Canola mitochondrion 77.39 80.46
CDY13168 Canola mitochondrion, plasma membrane 77.39 80.46
PGSC0003DMT400049398 Potato plasma membrane 72.93 80.35
Solyc10g084990.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 79.62 80.13
Bra014848.1-P Field mustard mitochondrion 76.75 79.8
AT3G54020.1 Thale cress mitochondrion, plasma membrane 77.07 79.34
CDX91395 Canola mitochondrion, plasma membrane 76.75 79.02
CDY18417 Canola plasma membrane 76.11 78.36
Bra017148.1-P Field mustard plasma membrane 76.11 78.36
AT2G37940.1 Thale cress mitochondrion, plasma membrane 76.11 78.36
CDX93341 Canola plasma membrane 76.11 78.36
Solyc09g011740.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 78.34 77.85
CDX74925 Canola mitochondrion, plasma membrane 75.8 77.78
Bra000029.1-P Field mustard plasma membrane 73.25 77.7
CDY07761 Canola mitochondrion, plasma membrane 75.8 77.27
Bra005148.1-P Field mustard mitochondrion, plasma membrane 74.52 77.23
Solyc10g086690.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 71.97 77.13
CDY14501 Canola mitochondrion, plasma membrane 75.48 76.7
CDY69104 Canola mitochondrion, plasma membrane 75.48 76.7
PGSC0003DMT400052472 Potato plasma membrane 77.07 76.58
GSMUA_Achr6P23620_001 Banana golgi 72.29 72.52
GSMUA_Achr3P17660_001 Banana cytosol, golgi, mitochondrion, plasma membrane 71.02 71.02
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion, plasma membrane 71.02 71.02
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plasma membrane 71.02 70.57
HORVU1Hr1G073060.1 Barley plasma membrane 71.66 70.53
HORVU1Hr1G073040.1 Barley plasma membrane 71.66 70.53
Zm00001d038343_P001 Maize plasma membrane 71.02 69.91
TraesCS1B01G289300.1 Wheat plasma membrane 71.66 69.88
Os05t0452900-02 Rice cytosol, golgi, mitochondrion, plasma membrane 72.29 69.85
TraesCS1D01G279500.1 Wheat plasma membrane 71.34 69.57
Os01t0850100-01 Rice cytosol, golgi, mitochondrion, plasma membrane 71.97 69.33
EES19630 Sorghum cytosol, golgi, plasma membrane 70.38 69.28
EES01758 Sorghum mitochondrion 71.34 69.14
Os05t0287800-01 Rice mitochondrion 68.79 69.01
Zm00001d012380_P002 Maize plasma membrane 71.02 68.83
TraesCS3B01G396900.1 Wheat golgi 71.34 68.71
Zm00001d030613_P003 Maize mitochondrion, plasma membrane 68.47 68.69
TraesCS1A01G280400.1 Wheat plasma membrane 70.06 68.54
TraesCS3A01G365000.1 Wheat plasma membrane 71.02 68.4
TraesCS3D01G358200.1 Wheat golgi 71.02 68.4
KXG23698 Sorghum mitochondrion 68.15 68.37
Zm00001d041608_P001 Maize mitochondrion, plasma membrane 67.52 67.73
Zm00001d046198_P001 Maize endoplasmic reticulum, plasma membrane 10.19 66.67
Zm00001d042851_P003 Maize golgi, plasma membrane, plastid 71.02 62.82
CDY18431 Canola plasma membrane 45.86 62.07
HORVU3Hr1G085630.8 Barley plastid 65.61 58.52
Protein Annotations
EntrezGene:100815011MapMan:5.4.13.1EnsemblPlantsGene:GLYMA_U027900GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005802GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0030148GO:GO:0045140UniProt:I1JLW4EnsemblPlants:KRG88789ProteinID:KRG88789
ProteinID:KRG88789.1PFAM:PF14360PANTHER:PTHR21290PANTHER:PTHR21290:SF33InterPro:Sphingomyelin_synth-like_domTMHMM:TMhelix
UniParc:UPI0002336B54:::::
Description
hypothetical protein
Coordinates
chrscaffold_27:-:305186..309757
Molecular Weight (calculated)
35685.7 Da
IEP (calculated)
9.517
GRAVY (calculated)
0.128
Length
314 amino acids
Sequence
(BLAST)
001: MSFYIGREAS KLWKRICAET TTEVNLLAEN WKYLLAGLVC QYIHGLAARG VHYLHRPGPT LQDVGFFLLP ELGQDKAYIS ETLFAMIFIS FVLWTFHPFI
101: LKNRKIYTVL IWCRVLAFLV ASQVLRIITF YSTQLPGPNY HCREGSKLAT LPRPDTVLEV LLINFPRGVV YGCGDLIFSS HMIFTLVFVL TYQKYGTRRS
201: IKQLGWLLAV VQSLLIVASR KHYTVDVVVA WYTVNLVVFF IDKKLPELPD RSIAAATLLP LSTKDKDNRT KEENHKLLNG NSGDPADWRQ RTQVNGKIME
301: DGNTLHADSA MNGA
Best Arabidopsis Sequence Match ( AT3G54020.1 )
(BLAST)
001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
Arabidopsis Description
IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.