Factsheet for Solyc09g011740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc02g093290.2.1
Solyc03g005980.2.1
Solyc03g044430.2.1
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54020.1	Solyc02g093290.2.1	AT2G23420.1	21798944
AT3G54020.1	Solyc03g044430.2.1	AT2G23420.1	21798944
AT3G54020.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT3G54020.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT3G54020.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT3G54020.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052472	Potato	plasma membrane	97.47	97.47
Solyc10g084990.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	81.65	82.69
Solyc10g086690.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	75.95	81.91
KRH75771	Soybean	cytosol, golgi, mitochondrion, peroxisome	78.16	78.66
KRG88789	Soybean	cytosol, golgi, mitochondrion, plasma membrane	77.85	78.34
VIT_08s0007g01510.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane	77.85	77.85
AT2G37940.1	Thale cress	mitochondrion, plasma membrane	73.42	76.07
AT3G54020.1	Thale cress	mitochondrion, plasma membrane	73.1	75.74
CDY18417	Canola	plasma membrane	73.1	75.74
Bra017148.1-P	Field mustard	plasma membrane	73.1	75.74
CDX93341	Canola	plasma membrane	72.78	75.41
CDY13168	Canola	mitochondrion, plasma membrane	71.84	75.17
CDX76176	Canola	mitochondrion	71.84	75.17
CDX91395	Canola	mitochondrion, plasma membrane	72.47	75.08
CDX74925	Canola	mitochondrion, plasma membrane	72.15	74.51
Bra014848.1-P	Field mustard	mitochondrion	71.2	74.5
KRH00099	Soybean	golgi	74.37	74.37
CDY07761	Canola	mitochondrion, plasma membrane	72.47	74.35
Bra000029.1-P	Field mustard	plasma membrane	69.62	74.32
CDY14501	Canola	mitochondrion, plasma membrane	72.47	74.11
CDY69104	Canola	mitochondrion, plasma membrane	72.47	74.11
Bra005148.1-P	Field mustard	mitochondrion, plasma membrane	70.89	73.93
Zm00001d046198_P001	Maize	endoplasmic reticulum, plasma membrane	11.08	72.92
KRH49241	Soybean	mitochondrion	73.1	72.87
Zm00001d038343_P001	Maize	plasma membrane	68.04	67.4
TraesCS3A01G365000.1	Wheat	plasma membrane	68.99	66.87
TraesCS3B01G396900.1	Wheat	golgi	68.67	66.56
TraesCS3D01G358200.1	Wheat	golgi	68.35	66.26
Os01t0850100-01	Rice	cytosol, golgi, mitochondrion, plasma membrane	68.35	66.26
EES19630	Sorghum	cytosol, golgi, plasma membrane	66.77	66.14
GSMUA_AchrUn_...	Banana	cytosol, golgi, mitochondrion, plasma membrane	65.82	65.82
EES01758	Sorghum	mitochondrion	67.09	65.43
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion, plasma membrane	64.87	65.29
HORVU1Hr1G073060.1	Barley	plasma membrane	65.82	65.2
HORVU1Hr1G073040.1	Barley	plasma membrane	65.82	65.2
GSMUA_Achr6P23620_001	Banana	golgi	64.56	65.18
Os05t0287800-01	Rice	mitochondrion	64.24	64.86
KXG23698	Sorghum	mitochondrion	63.61	64.22
Zm00001d012380_P002	Maize	plasma membrane	65.82	64.2
GSMUA_Achr3P17660_001	Banana	cytosol, golgi, mitochondrion, plasma membrane	63.61	64.01
Os05t0452900-02	Rice	cytosol, golgi, mitochondrion, plasma membrane	65.82	64.0
TraesCS1D01G279500.1	Wheat	plasma membrane	65.19	63.98
TraesCS1B01G289300.1	Wheat	plasma membrane	64.87	63.66
Zm00001d030613_P003	Maize	mitochondrion, plasma membrane	62.97	63.58
Zm00001d041608_P001	Maize	mitochondrion, plasma membrane	62.97	63.58
TraesCS1A01G280400.1	Wheat	plasma membrane	64.24	63.24
Zm00001d042851_P003	Maize	golgi, plasma membrane, plastid	66.46	59.15
CDY18431	Canola	plasma membrane	43.35	59.05
HORVU3Hr1G085630.8	Barley	plastid	64.56	57.95

Protein Annotations

MapMan:5.4.13.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005802	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0030148
GO:GO:0045140	UniProt:K4CRK0	PFAM:PF14360	PANTHER:PTHR21290	PANTHER:PTHR21290:SF46	EnsemblPlantsGene:Solyc09g011740.2
EnsemblPlants:Solyc09g011740.2.1	InterPro:Sphingomyelin_synth-like_dom	TMHMM:TMhelix	UniParc:UPI000276B52C	:	:

Description

No Description!

Coordinates

chr9:+:5033862..5037954

Molecular Weight (calculated)

36079.3 Da

IEP (calculated)

9.253

GRAVY (calculated)

0.175

Length

316 amino acids

Sequence
(BLAST)

001: MALVGTDKDM SFYIGREASK LWKRFCAEVT TEINLLAENW KYLLGGLICQ YIHGLAARGV HYFHRPGPIL QDVGFYLLPE LGQDRAYISE TVFTTIFLSF
101: VMWTFHPFIF KTKKIYTVLI WCRVLAFLVG CQFLRIITFY STQLPGPNYH CREGSKLATL PPPDNILQAL LIVPRGVLYG CGDLIFSSHM IFSLVFVRTY
201: QKYGTRRFIK QCAWLAVIAQ SFLIIASRKH YTVDVVVAWY TVNLVIFFID KTLPELPDRT SALLLPVTKD SKSKEENHKL LNGNSGDPAE WRPRTQINGK
301: IVEDGKTLHE AVINGV

Best Arabidopsis Sequence Match ( AT2G37940.2 )
(BLAST)

001: MTLYIRRESS KLWKRFCSEI STEIGLLAEN WKYLLAGLIC QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI
101: LKTKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVSR LPWPKSALEV LEINPHGVMY GCGDLIFSSH MIFTLVFVRT YQKYGTKRFI
201: KLFGWLTAIV QSLLIIASRK HYSVDVVVAW YTVNLVVFCL DKKLPELPDR TAVLLPVISK DRTKEENHKL LNGNGVDPAD WRPRAQVNGK IDSNGVHTDN
301: TMNGA

Arabidopsis Description

IPCS2ERH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV03]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.