Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13168 | Canola | mitochondrion, plasma membrane | 92.13 | 93.05 |
| CDX76176 | Canola | mitochondrion | 91.8 | 92.72 |
| Bra014848.1-P | Field mustard | mitochondrion | 90.82 | 91.72 |
| AT2G37940.1 | Thale cress | mitochondrion, plasma membrane | 85.57 | 85.57 |
| KRG88789 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 79.34 | 77.07 |
| KRH75771 | Soybean | cytosol, golgi, mitochondrion, peroxisome | 78.36 | 76.11 |
| PGSC0003DMT400028621 | Potato | cytosol, golgi, plasma membrane | 77.05 | 76.05 |
| VIT_08s0007g01510.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane | 78.69 | 75.95 |
| PGSC0003DMT400049398 | Potato | plasma membrane | 70.82 | 75.79 |
| KRH00099 | Soybean | golgi | 78.03 | 75.32 |
| Solyc10g084990.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 76.39 | 74.68 |
| KRH49241 | Soybean | mitochondrion | 76.72 | 73.82 |
| Solyc10g086690.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 70.49 | 73.38 |
| Solyc09g011740.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 75.74 | 73.1 |
| PGSC0003DMT400052472 | Potato | plasma membrane | 75.08 | 72.47 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 72.79 | 70.25 |
| GSMUA_Achr3P17660_001 | Banana | cytosol, golgi, mitochondrion, plasma membrane | 72.13 | 70.06 |
| GSMUA_Achr6P23620_001 | Banana | golgi | 71.8 | 69.97 |
| EES19630 | Sorghum | cytosol, golgi, plasma membrane | 73.11 | 69.91 |
| Zm00001d038343_P001 | Maize | plasma membrane | 73.11 | 69.91 |
| Os01t0850100-01 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 74.43 | 69.63 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 71.48 | 69.43 |
| TraesCS3A01G365000.1 | Wheat | plasma membrane | 74.1 | 69.33 |
| TraesCS3B01G396900.1 | Wheat | golgi | 73.77 | 69.02 |
| HORVU1Hr1G073060.1 | Barley | plasma membrane | 72.13 | 68.97 |
| HORVU1Hr1G073040.1 | Barley | plasma membrane | 72.13 | 68.97 |
| Zm00001d046198_P001 | Maize | endoplasmic reticulum, plasma membrane | 10.82 | 68.75 |
| TraesCS3D01G358200.1 | Wheat | golgi | 73.44 | 68.71 |
| Os05t0287800-01 | Rice | mitochondrion | 70.49 | 68.69 |
| TraesCS1B01G289300.1 | Wheat | plasma membrane | 72.46 | 68.63 |
| TraesCS1D01G279500.1 | Wheat | plasma membrane | 72.46 | 68.63 |
| TraesCS1A01G280400.1 | Wheat | plasma membrane | 71.48 | 67.91 |
| Os05t0452900-02 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 72.13 | 67.69 |
| EES01758 | Sorghum | mitochondrion | 71.8 | 67.59 |
| Zm00001d041608_P001 | Maize | mitochondrion, plasma membrane | 69.18 | 67.41 |
| AT2G29525.1 | Thale cress | plasma membrane | 63.61 | 67.13 |
| KXG23698 | Sorghum | mitochondrion | 68.85 | 67.09 |
| Zm00001d012380_P002 | Maize | plasma membrane | 70.49 | 66.36 |
| Zm00001d030613_P003 | Maize | mitochondrion, plasma membrane | 67.87 | 66.13 |
| Zm00001d042851_P003 | Maize | golgi, plasma membrane, plastid | 71.48 | 61.41 |
| HORVU3Hr1G085630.8 | Barley | plastid | 67.54 | 58.52 |
Protein Annotations
| MapMan:5.4.13.1 | EntrezGene:824569 | ProteinID:AEE79176.1 | ArrayExpress:AT3G54020 | EnsemblPlantsGene:AT3G54020 | RefSeq:AT3G54020 |
| TAIR:AT3G54020 | RefSeq:AT3G54020-TAIR-G | EnsemblPlants:AT3G54020.1 | TAIR:AT3G54020.1 | EMBL:AY048287 | EMBL:AY139802 |
| Unigene:At.1413 | Symbol:AtIPCS1 | ProteinID:CAB88364.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006629 |
| GO:GO:0006665 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0030148 | GO:GO:0045140 | RefSeq:NP_190970.1 | PFAM:PF14360 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000293 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009046 |
| PO:PO:0009047 | PANTHER:PTHR21290 | PANTHER:PTHR21290:SF33 | UniProt:Q9M325 | InterPro:Sphingomyelin_synth-like_dom | TMHMM:TMhelix |
| UniParc:UPI00000A5153 | SEG:seg | : | : | : | : |
Description
IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
Coordinates
chr3:+:20005616..20008254
Molecular Weight (calculated)
34858.7 Da
IEP (calculated)
9.790
GRAVY (calculated)
0.121
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.