Factsheet for AT2G29525.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05800.t01	Wine grape	mitochondrion	70.93	70.45
AT3G54020.1	Thale cress	mitochondrion, plasma membrane	67.13	63.61
TraesCS3B01G396900.1	Wheat	golgi	70.24	62.27
GSMUA_Achr6P23620_001	Banana	golgi	67.13	61.98
TraesCS3A01G365000.1	Wheat	plasma membrane	69.9	61.96
TraesCS3D01G358200.1	Wheat	golgi	69.2	61.35
GSMUA_Achr3P17660_001	Banana	cytosol, golgi, mitochondrion, plasma membrane	66.09	60.83
EES01758	Sorghum	mitochondrion	68.17	60.8
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion, plasma membrane	65.74	60.51
Zm00001d038343_P001	Maize	plasma membrane	66.78	60.5
EES19630	Sorghum	cytosol, golgi, plasma membrane	66.78	60.5
Zm00001d012380_P002	Maize	plasma membrane	67.47	60.19
Os01t0850100-01	Rice	cytosol, golgi, mitochondrion, plasma membrane	67.82	60.12
AT2G37940.1	Thale cress	mitochondrion, plasma membrane	63.32	60.0
HORVU1Hr1G073060.1	Barley	plasma membrane	65.74	59.56
HORVU1Hr1G073040.1	Barley	plasma membrane	65.74	59.56
KXG23698	Sorghum	mitochondrion	64.36	59.42
GSMUA_AchrUn_...	Banana	cytosol, golgi, mitochondrion, plasma membrane	64.71	59.18
TraesCS1B01G289300.1	Wheat	plasma membrane	65.74	59.01
Os05t0287800-01	Rice	mitochondrion	63.67	58.79
TraesCS1D01G279500.1	Wheat	plasma membrane	65.4	58.7
TraesCS1A01G280400.1	Wheat	plasma membrane	65.05	58.57
Zm00001d041608_P001	Maize	mitochondrion, plasma membrane	63.32	58.47
Zm00001d030613_P003	Maize	mitochondrion, plasma membrane	63.32	58.47
Os05t0452900-02	Rice	cytosol, golgi, mitochondrion, plasma membrane	65.74	58.46
Zm00001d046198_P001	Maize	endoplasmic reticulum, plasma membrane	9.34	56.25
Zm00001d042851_P003	Maize	golgi, plasma membrane, plastid	66.78	54.37
HORVU3Hr1G085630.8	Barley	plastid	63.32	51.99

Protein Annotations

MapMan:5.4.13.1	EntrezGene:817501	EMBL:AC004561	ProteinID:AEC08263.1	ProteinID:AEC08264.1	ProteinID:AEC08265.1
EMBL:AK221522	ProteinID:ANM62493.1	ArrayExpress:AT2G29525	EnsemblPlantsGene:AT2G29525	RefSeq:AT2G29525	TAIR:AT2G29525
RefSeq:AT2G29525-TAIR-G	EnsemblPlants:AT2G29525.1	TAIR:AT2G29525.1	EMBL:AY231431	Unigene:At.66368	Symbol:AtIPCS3
EMBL:BX820662	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005802	GO:GO:0006629	GO:GO:0006665	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0030148	GO:GO:0045140	RefSeq:NP_001189633.1	RefSeq:NP_001318312.1	RefSeq:NP_850134.2	RefSeq:NP_973560.1
PFAM:PF14360	PO:PO:0000013	PO:PO:0000014	PO:PO:0000293	PO:PO:0009001	PO:PO:0009005
PO:PO:0009046	PO:PO:0009047	PANTHER:PTHR21290	PANTHER:PTHR21290:SF46	UniProt:Q56Y01	InterPro:Sphingomyelin_synth-like_dom
TMHMM:TMhelix	UniParc:UPI000034EDC6	SEG:seg	:	:	:

Description

IPCS3Phosphatidylinositol:ceramide inositolphosphotransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y01]

Coordinates

chr2:+:12638284..12640820

Molecular Weight (calculated)

32982.3 Da

IEP (calculated)

9.541

GRAVY (calculated)

0.144

Length

289 amino acids

Sequence
(BLAST)

001: MPVYVDREAP KLWRRIYSEA TLEASLLAEK WKLVLAGLVF QYIHGLAAHG VHYLHRPGPT LQDAGFFILP ALGQDKAFFS ETVFVTIFGS FILWTFHPFV
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.