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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • mitochondrion 2
  • golgi 1
  • plasma membrane 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:golgi, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003674_P001
Zm00001d003675_P001
Zm00001d025412_P001
Zm00001d034777_P005

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G54020.1 Zm00001d003674_P001 AT2G23420.1 21798944
AT3G54020.1 Zm00001d003675_P001 AT2G23420.1 21798944
AT3G54020.1 Zm00001d025412_P001 AT2G23420.1 21798944
AT3G54020.1 Zm00001d034777_P005 AT2G23420.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01758 Sorghum mitochondrion 85.63 93.83
Zm00001d012380_P002 Maize plasma membrane 84.23 92.28
Os01t0850100-01 Rice cytosol, golgi, mitochondrion, plasma membrane 79.72 86.81
TraesCS3A01G365000.1 Wheat plasma membrane 78.03 84.97
TraesCS3B01G396900.1 Wheat golgi 77.75 84.66
TraesCS3D01G358200.1 Wheat golgi 76.9 83.74
Zm00001d038343_P001 Maize plasma membrane 71.55 79.62
GSMUA_Achr3P17660_001 Banana cytosol, golgi, mitochondrion, plasma membrane 66.2 74.84
GSMUA_Achr6P23620_001 Banana golgi 65.35 74.12
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion, plasma membrane 65.35 73.89
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plasma membrane 65.63 73.73
HORVU3Hr1G085630.8 Barley plastid 72.11 72.73
KRH00099 Soybean golgi 64.51 72.47
VIT_06s0004g05800.t01 Wine grape mitochondrion 58.59 71.48
AT3G54020.1 Thale cress mitochondrion, plasma membrane 61.41 71.48
KRG88789 Soybean cytosol, golgi, mitochondrion, plasma membrane 62.82 71.02
Bra000029.1-P Field mustard plasma membrane 58.59 70.27
VIT_08s0007g01510.t01 Wine grape cytosol, golgi, mitochondrion, plasma membrane 62.54 70.25
CDX76176 Canola mitochondrion 59.72 70.2
CDY13168 Canola mitochondrion, plasma membrane 59.72 70.2
KRH75771 Soybean cytosol, golgi, mitochondrion, peroxisome 61.97 70.06
PGSC0003DMT400049398 Potato plasma membrane 56.06 69.82
KRH49241 Soybean mitochondrion 62.25 69.72
CDX91395 Canola mitochondrion, plasma membrane 59.72 69.51
PGSC0003DMT400028621 Potato cytosol, golgi, plasma membrane 60.28 69.26
Bra014848.1-P Field mustard mitochondrion 58.87 69.21
AT2G37940.1 Thale cress mitochondrion, plasma membrane 59.44 69.18
CDY69104 Canola mitochondrion, plasma membrane 60.0 68.93
CDY14501 Canola mitochondrion, plasma membrane 60.0 68.93
CDY18417 Canola plasma membrane 59.15 68.85
Bra017148.1-P Field mustard plasma membrane 59.15 68.85
CDX93341 Canola plasma membrane 59.15 68.85
Zm00001d046198_P001 Maize endoplasmic reticulum, plasma membrane 9.3 68.75
CDY07761 Canola mitochondrion, plasma membrane 59.15 68.18
CDX74925 Canola mitochondrion, plasma membrane 58.59 67.97
Bra005148.1-P Field mustard mitochondrion, plasma membrane 57.75 67.66
Solyc10g086690.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 55.49 67.24
Zm00001d041608_P001 Maize mitochondrion, plasma membrane 59.15 67.09
Solyc10g084990.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 58.87 66.99
AT2G29525.1 Thale cress plasma membrane 54.37 66.78
Zm00001d030613_P003 Maize mitochondrion, plasma membrane 58.87 66.77
Solyc09g011740.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 59.15 66.46
PGSC0003DMT400052472 Potato plasma membrane 58.59 65.82
CDY18431 Canola plasma membrane 36.34 55.6
Protein Annotations
EnsemblPlants:Zm00001d042851_P003EnsemblPlants:Zm00001d042851_T003EnsemblPlantsGene:Zm00001d042851EntrezGene:100382910GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Sphingomyelin_synth-like_domPANTHER:PTHR21290
PANTHER:PTHR21290:SF46PFAM:PF14360ProteinID:ONM36403.1ProteinID:ONM36406.1ProteinID:ONM36407.1SEG:seg
TMHMM:TMhelixUniParc:UPI000843EF73UniProt:A0A1D6N735MapMan:5.4.13.1::
Description
Phosphatidylinositol:ceramide inositolphosphotransferase 1
Coordinates
chr3:-:182063988..182069662
Molecular Weight (calculated)
40505.3 Da
IEP (calculated)
9.524
GRAVY (calculated)
-0.040
Length
355 amino acids
Sequence
(BLAST)
001: MGVTQPGSSG GCWRTRAGTG SCGHDDVRRP GVYQVYASAQ LWRRVCAETT AELQLLFEKW QLLLAGLVFQ YIHGLAARGV HYLHRPGPLL QDLGFMALPE
101: LGQEKGYLSE SLFTFIFISF FLWSFHPFVY HSKRFYTVLL WRRVLAFLVA SQFLRIMTFY STQLPGPNYH CREGSKLATL PPPNNALEVL LINFPRGVLF
201: GCGDLIFSSH MIFTLVFVRT YHKYGSNRLI KLLSWLMAII QSLLIIASRK HYTVDVVVAW YTVNLVVFFV DKKLPEMPDR TNGLSLLPVN TKDKDGRMKE
301: ELHKLEKDGR MMDEFHKLLN GNTVDATDWR QRVQINGKHG EDTNHTVSDA TPTGT
Best Arabidopsis Sequence Match ( AT2G29525.1 )
(BLAST)
001: MPVYVDREAP KLWRRIYSEA TLEASLLAEK WKLVLAGLVF QYIHGLAAHG VHYLHRPGPT LQDAGFFILP ALGQDKAFFS ETVFVTIFGS FILWTFHPFV
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH
Arabidopsis Description
IPCS3Phosphatidylinositol:ceramide inositolphosphotransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y01]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.