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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:
  • plastid 1
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74925 Canola mitochondrion, plasma membrane 99.34 98.37
Bra017148.1-P Field mustard plasma membrane 94.72 94.1
AT2G37940.1 Thale cress mitochondrion, plasma membrane 94.72 94.1
Bra000029.1-P Field mustard plasma membrane 90.1 92.23
Bra014848.1-P Field mustard mitochondrion 84.49 84.77
KRG88789 Soybean cytosol, golgi, mitochondrion, plasma membrane 77.23 74.52
KRH75771 Soybean cytosol, golgi, mitochondrion, peroxisome 76.57 73.89
VIT_08s0007g01510.t01 Wine grape cytosol, golgi, mitochondrion, plasma membrane 76.57 73.42
Zm00001d046198_P001 Maize endoplasmic reticulum, plasma membrane 11.55 72.92
KRH00099 Soybean golgi 75.91 72.78
PGSC0003DMT400049398 Potato plasma membrane 67.99 72.28
PGSC0003DMT400028621 Potato cytosol, golgi, plasma membrane 73.6 72.17
KRH49241 Soybean mitochondrion 75.25 71.92
Solyc09g011740.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 73.93 70.89
PGSC0003DMT400052472 Potato plasma membrane 73.6 70.57
Solyc10g084990.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 72.61 70.51
Solyc10g086690.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 67.33 69.62
GSMUA_Achr3P17660_001 Banana cytosol, golgi, mitochondrion, plasma membrane 70.3 67.83
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plasma membrane 69.64 66.77
GSMUA_Achr6P23620_001 Banana golgi 68.65 66.45
Zm00001d038343_P001 Maize plasma membrane 69.64 66.14
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion, plasma membrane 67.99 65.61
EES19630 Sorghum cytosol, golgi, plasma membrane 68.98 65.52
HORVU1Hr1G073060.1 Barley plasma membrane 67.66 64.26
HORVU1Hr1G073040.1 Barley plasma membrane 67.66 64.26
Os01t0850100-01 Rice cytosol, golgi, mitochondrion, plasma membrane 68.65 63.8
TraesCS3D01G358200.1 Wheat golgi 68.65 63.8
TraesCS3B01G396900.1 Wheat golgi 68.65 63.8
TraesCS3A01G365000.1 Wheat plasma membrane 68.65 63.8
Os05t0452900-02 Rice cytosol, golgi, mitochondrion, plasma membrane 68.32 63.69
Os05t0287800-01 Rice mitochondrion 65.68 63.58
EES01758 Sorghum mitochondrion 67.66 63.27
TraesCS1D01G279500.1 Wheat plasma membrane 67.0 63.04
Zm00001d041608_P001 Maize mitochondrion, plasma membrane 65.02 62.94
TraesCS1B01G289300.1 Wheat plasma membrane 66.67 62.73
Zm00001d012380_P002 Maize plasma membrane 67.0 62.65
KXG23698 Sorghum mitochondrion 64.69 62.62
Zm00001d030613_P003 Maize mitochondrion, plasma membrane 64.36 62.3
TraesCS1A01G280400.1 Wheat plasma membrane 65.68 61.99
Zm00001d042851_P003 Maize golgi, plasma membrane, plastid 67.66 57.75
HORVU3Hr1G085630.8 Barley plastid 63.37 54.55
Protein Annotations
EnsemblPlants:Bra005148.1EnsemblPlants:Bra005148.1-PEnsemblPlantsGene:Bra005148GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sphingomyelin_synth-like_domPANTHER:PTHR21290PANTHER:PTHR21290:SF33PFAM:PF14360SEG:segTMHMM:TMhelix
UniParc:UPI00025478ABUniProt:M4CLR1MapMan:5.4.13.1:::
Description
AT2G37940 (E=2e-157) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 316 Blast hits to 316 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Coordinates
chrA05:-:3723266..3725230
Molecular Weight (calculated)
34800.7 Da
IEP (calculated)
9.603
GRAVY (calculated)
0.160
Length
303 amino acids
Sequence
(BLAST)
001: MTLYIRRESS KLWKRFWSEI ATEIGLLAEN WKYLLAGIIC QYIHGLAAKG VHYIHRPGPT LQDLGYFLLP ELGQERSYIS ETVFTSVFVS FFLWTFHPFI
101: LKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVST LPWPKSALEV LEINPHGVMY GCGDLIFSSH MIFTLVFVLT YQKYGTKRFI
201: KLFGWLIAFV QSLLIIASRK HYTVDVVVAW YTVNLVVFCL DKKLPDRTTV LLPVISKERT KEENHKLLLN GNGVDPADWR PRAQVNGKID SNGVHTDNSL
301: NGA
Best Arabidopsis Sequence Match ( AT2G37940.2 )
(BLAST)
001: MTLYIRRESS KLWKRFCSEI STEIGLLAEN WKYLLAGLIC QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI
101: LKTKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVSR LPWPKSALEV LEINPHGVMY GCGDLIFSSH MIFTLVFVRT YQKYGTKRFI
201: KLFGWLTAIV QSLLIIASRK HYSVDVVVAW YTVNLVVFCL DKKLPELPDR TAVLLPVISK DRTKEENHKL LNGNGVDPAD WRPRAQVNGK IDSNGVHTDN
301: TMNGA
Arabidopsis Description
IPCS2ERH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV03]
SUBAcon: [plasma membrane,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.