CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:

plastid 1
golgi 2
extracellular 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005148.1-P	Field mustard	mitochondrion, plasma membrane	98.37	99.34
CDX91395	Canola	mitochondrion, plasma membrane	96.73	97.05
CDX93341	Canola	plasma membrane	95.75	96.07
CDY18417	Canola	plasma membrane	95.42	95.74
AT2G37940.1	Thale cress	mitochondrion, plasma membrane	94.77	95.08
CDY14501	Canola	mitochondrion, plasma membrane	95.1	94.17
CDY69104	Canola	mitochondrion, plasma membrane	95.1	94.17
CDY07761	Canola	mitochondrion, plasma membrane	94.12	93.51
CDX76176	Canola	mitochondrion	85.29	86.42
CDY13168	Canola	mitochondrion, plasma membrane	85.29	86.42
KRG88789	Soybean	cytosol, golgi, mitochondrion, plasma membrane	77.78	75.8
CDY18431	Canola	plasma membrane	57.19	75.43
KRH75771	Soybean	cytosol, golgi, mitochondrion, peroxisome	77.12	75.16
VIT_08s0007g01510.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane	77.12	74.68
KRH00099	Soybean	golgi	76.47	74.05
PGSC0003DMT400028621	Potato	cytosol, golgi, plasma membrane	74.18	73.46
PGSC0003DMT400049398	Potato	plasma membrane	68.3	73.33
KRH49241	Soybean	mitochondrion	75.82	73.19
Zm00001d046198_P001	Maize	endoplasmic reticulum, plasma membrane	11.44	72.92
Solyc09g011740.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	74.51	72.15
PGSC0003DMT400052472	Potato	plasma membrane	74.18	71.84
Solyc10g084990.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	73.2	71.79
Solyc10g086690.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	67.65	70.65
GSMUA_Achr3P17660_001	Banana	cytosol, golgi, mitochondrion, plasma membrane	70.26	68.47
GSMUA_AchrUn_...	Banana	cytosol, golgi, mitochondrion, plasma membrane	69.61	67.41
GSMUA_Achr6P23620_001	Banana	golgi	68.63	67.09
Zm00001d038343_P001	Maize	plasma membrane	69.61	66.77
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion, plasma membrane	67.97	66.24
EES19630	Sorghum	cytosol, golgi, plasma membrane	68.95	66.14
HORVU1Hr1G073060.1	Barley	plasma membrane	67.97	65.2
HORVU1Hr1G073040.1	Barley	plasma membrane	67.97	65.2
Os05t0287800-01	Rice	mitochondrion	66.01	64.54
TraesCS3B01G396900.1	Wheat	golgi	68.63	64.42
TraesCS3A01G365000.1	Wheat	plasma membrane	68.63	64.42
Os05t0452900-02	Rice	cytosol, golgi, mitochondrion, plasma membrane	68.3	64.31
EES01758	Sorghum	mitochondrion	67.97	64.2
Os01t0850100-01	Rice	cytosol, golgi, mitochondrion, plasma membrane	68.3	64.11
TraesCS3D01G358200.1	Wheat	golgi	68.3	64.11
TraesCS1D01G279500.1	Wheat	plasma membrane	67.32	63.98
Zm00001d041608_P001	Maize	mitochondrion, plasma membrane	65.36	63.9
TraesCS1B01G289300.1	Wheat	plasma membrane	66.99	63.66
KXG23698	Sorghum	mitochondrion	65.03	63.58
Zm00001d012380_P002	Maize	plasma membrane	66.99	63.27
Zm00001d030613_P003	Maize	mitochondrion, plasma membrane	64.71	63.26
TraesCS1A01G280400.1	Wheat	plasma membrane	66.01	62.93
Zm00001d042851_P003	Maize	golgi, plasma membrane, plastid	67.97	58.59
HORVU3Hr1G085630.8	Barley	plastid	63.4	55.11

Protein Annotations

EnsemblPlants:CDX74925	EnsemblPlantsGene:GSBRNA2T00116927001	GO:A0A078CDG7	InterPro:Sphingomyelin_synth-like_dom	PANTHER:PTHR21290	PANTHER:PTHR21290:SF33
PFAM:PF14360	ProteinID:CDX74925	ProteinID:CDX74925.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE2BCD
MapMan:5.4.13.1	:	:	:	:	:

Description

BnaA05g06710D

Coordinates

chrLK031802:-:1486937..1489319

Molecular Weight (calculated)

35171.0 Da

IEP (calculated)

9.493

GRAVY (calculated)

0.123

Length

306 amino acids

Sequence
(BLAST)

001: MTLYIRRESS KLWKRFWSEI TTEIGLLAEN WKYLLAGIIC QYIHGLAAKG VHYIHRPGPT LQDLGYFLLP ELGQERSYIS ETVFTSVFVS FFLWTFHPFI
101: LKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVST LPWPKSALEV LEINPHGVMY GCGDLIFSSH MIFTLVFVLT YQKYGTKRFI
201: KLFGWLIAFV QSLLIIASRK HYTVDVVVAW YTVNLVVFCL DKKLPELPDR TTVLLPVISK ERTKEENNHK LLNGNGVDPA DWRPRAQVNG KIDSNGVHTD
301: NSLNGA

Best Arabidopsis Sequence Match ( AT2G37940.2 )
(BLAST)

001: MTLYIRRESS KLWKRFCSEI STEIGLLAEN WKYLLAGLIC QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI
101: LKTKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVSR LPWPKSALEV LEINPHGVMY GCGDLIFSSH MIFTLVFVRT YQKYGTKRFI
201: KLFGWLTAIV QSLLIIASRK HYSVDVVVAW YTVNLVVFCL DKKLPELPDR TAVLLPVISK DRTKEENHKL LNGNGVDPAD WRPRAQVNGK IDSNGVHTDN
301: TMNGA

Arabidopsis Description

IPCS2ERH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV03]
SUBAcon: [plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.