Factsheet for Os05t0452900-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0837300-02
Os04t0429800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54020.1	Os03t0837300-02	AT2G23420.1	21798944
AT3G54020.1	Os04t0429800-01	AT2G23420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038343_P001	Maize	plasma membrane	87.69	89.34
EES19630	Sorghum	cytosol, golgi, plasma membrane	87.38	89.03
TraesCS1D01G279500.1	Wheat	plasma membrane	85.54	86.34
HORVU1Hr1G073060.1	Barley	plasma membrane	84.62	86.21
HORVU1Hr1G073040.1	Barley	plasma membrane	84.62	86.21
TraesCS1B01G289300.1	Wheat	plasma membrane	84.62	85.4
TraesCS1A01G280400.1	Wheat	plasma membrane	83.69	84.74
Os01t0850100-01	Rice	cytosol, golgi, mitochondrion, plasma membrane	82.15	81.9
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion, plasma membrane	72.62	75.16
GSMUA_AchrUn_...	Banana	cytosol, golgi, mitochondrion, plasma membrane	72.92	75.0
GSMUA_Achr3P17660_001	Banana	cytosol, golgi, mitochondrion, plasma membrane	72.31	74.84
GSMUA_Achr6P23620_001	Banana	golgi	70.77	73.48
KRH00099	Soybean	golgi	71.08	73.1
CDY13168	Canola	mitochondrion, plasma membrane	67.38	72.52
CDX76176	Canola	mitochondrion	67.38	72.52
KRG88789	Soybean	cytosol, golgi, mitochondrion, plasma membrane	69.85	72.29
AT3G54020.1	Thale cress	mitochondrion, plasma membrane	67.69	72.13
PGSC0003DMT400049398	Potato	plasma membrane	63.08	71.93
KRH75771	Soybean	cytosol, golgi, mitochondrion, peroxisome	69.23	71.66
Bra014848.1-P	Field mustard	mitochondrion	66.46	71.52
Os05t0287800-01	Rice	mitochondrion	68.31	70.93
KRH49241	Soybean	mitochondrion	68.92	70.66
VIT_08s0007g01510.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane	68.62	70.57
VIT_06s0004g05800.t01	Wine grape	mitochondrion	62.77	70.1
Solyc10g086690.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	63.08	69.97
AT2G37940.1	Thale cress	mitochondrion, plasma membrane	64.62	68.85
CDX91395	Canola	mitochondrion, plasma membrane	64.62	68.85
Bra017148.1-P	Field mustard	plasma membrane	64.31	68.52
CDY18417	Canola	plasma membrane	64.31	68.52
CDX93341	Canola	plasma membrane	64.31	68.52
Bra005148.1-P	Field mustard	mitochondrion, plasma membrane	63.69	68.32
CDX74925	Canola	mitochondrion, plasma membrane	64.31	68.3
Bra000029.1-P	Field mustard	plasma membrane	62.15	68.24
PGSC0003DMT400028621	Potato	cytosol, golgi, plasma membrane	64.62	67.96
CDY69104	Canola	mitochondrion, plasma membrane	64.62	67.96
CDY14501	Canola	mitochondrion, plasma membrane	64.62	67.96
CDY07761	Canola	mitochondrion, plasma membrane	64.0	67.53
Solyc10g084990.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	64.31	66.99
Solyc09g011740.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	64.0	65.82
AT2G29525.1	Thale cress	plasma membrane	58.46	65.74
PGSC0003DMT400052472	Potato	plasma membrane	62.77	64.56
CDY18431	Canola	plasma membrane	40.0	56.03

Protein Annotations

EntrezGene:4338968	MapMan:5.4.13.1	ProteinID:AAT47032.1	EMBL:AK069695	EMBL:AK104063	ProteinID:BAF17626.1
ProteinID:BAS94335.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005802	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0030148
GO:GO:0045140	EnsemblPlantsGene:Os05g0452900	EnsemblPlants:Os05t0452900-02	PFAM:PF14360	PANTHER:PTHR21290	PANTHER:PTHR21290:SF46
UniProt:Q6I647	InterPro:Sphingomyelin_synth-like_dom	TMHMM:TMhelix	UniParc:UPI00003B0D2C	RefSeq:XP_015637416.1	SEG:seg

Description

Similar to phosphatidic acid phosphatase-related / PAP2-related. (Os05t0452900-01);Similar to Phosphatidic acid phosphatase-like protein. (Os05t0452900-02)

Coordinates

chr5:-:22214698..22219616

Molecular Weight (calculated)

37240.3 Da

IEP (calculated)

9.959

GRAVY (calculated)

-0.007

Length

325 amino acids

Sequence
(BLAST)

001: MTIYIAREAS KVWRKVTTET SVELSLLREK WGLLLAGIVF QYIHGLAARG VHYLHRPGPL LQDLGFMALP EFGQDKGYLS ESIFASIFAS FVLWTFHPFI
101: YHSKRFYTVL IWRRVLAFLV ASQVLRIITF YSTQLPGPNY HCREGSKLAT LPPPNNVFEV LLINFPRGVL FGCGDLIFSS HMIFTLVFVR TYHKYGSKRF
201: VKLLAWFMAI VQSLLIIASR KHYSVDVVVA WYTVNLVVFF VDNKLPEMPD RTNGVPLLPL STREKDGRLK EEKDSRLKEE FHKLLNGNHG DPTDRRQRAQ
301: MNGRHDEDIN HAHSTLSDAA VNGGT

Best Arabidopsis Sequence Match ( AT3G54020.1 )
(BLAST)

001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT

Arabidopsis Description

IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.