Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • plasma membrane 5
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:extracellular
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07761 Canola mitochondrion, plasma membrane 97.64 93.83
Bra017148.1-P Field mustard plasma membrane 93.92 91.15
AT2G37940.1 Thale cress mitochondrion, plasma membrane 93.24 90.49
Bra005148.1-P Field mustard mitochondrion, plasma membrane 92.23 90.1
Bra014848.1-P Field mustard mitochondrion 82.43 80.79
Zm00001d046198_P001 Maize endoplasmic reticulum, plasma membrane 12.16 75.0
KRG88789 Soybean cytosol, golgi, mitochondrion, plasma membrane 77.7 73.25
KRH75771 Soybean cytosol, golgi, mitochondrion, peroxisome 76.69 72.29
VIT_08s0007g01510.t01 Wine grape cytosol, golgi, mitochondrion, plasma membrane 77.03 72.15
KRH00099 Soybean golgi 76.69 71.84
PGSC0003DMT400049398 Potato plasma membrane 68.58 71.23
PGSC0003DMT400028621 Potato cytosol, golgi, plasma membrane 74.32 71.2
KRH49241 Soybean mitochondrion 75.68 70.66
Solyc09g011740.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 74.32 69.62
Solyc10g084990.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 72.97 69.23
PGSC0003DMT400052472 Potato plasma membrane 73.65 68.99
Solyc10g086690.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 67.91 68.6
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plasma membrane 70.61 66.14
GSMUA_Achr6P23620_001 Banana golgi 69.93 66.13
GSMUA_Achr3P17660_001 Banana cytosol, golgi, mitochondrion, plasma membrane 69.93 65.92
EES19630 Sorghum cytosol, golgi, plasma membrane 70.61 65.52
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion, plasma membrane 69.26 65.29
Zm00001d038343_P001 Maize plasma membrane 70.27 65.2
TraesCS3B01G396900.1 Wheat golgi 70.61 64.11
Zm00001d041608_P001 Maize mitochondrion, plasma membrane 67.57 63.9
Os01t0850100-01 Rice cytosol, golgi, mitochondrion, plasma membrane 70.27 63.8
TraesCS3D01G358200.1 Wheat golgi 70.27 63.8
TraesCS3A01G365000.1 Wheat plasma membrane 70.27 63.8
HORVU1Hr1G073040.1 Barley plasma membrane 68.58 63.64
HORVU1Hr1G073060.1 Barley plasma membrane 68.58 63.64
EES01758 Sorghum mitochondrion 69.59 63.58
KXG23698 Sorghum mitochondrion 67.23 63.58
Os05t0287800-01 Rice mitochondrion 67.23 63.58
Zm00001d012380_P002 Maize plasma membrane 69.26 63.27
Zm00001d030613_P003 Maize mitochondrion, plasma membrane 66.89 63.26
TraesCS1D01G279500.1 Wheat plasma membrane 67.91 62.42
Os05t0452900-02 Rice cytosol, golgi, mitochondrion, plasma membrane 68.24 62.15
TraesCS1B01G289300.1 Wheat plasma membrane 67.57 62.11
TraesCS1A01G280400.1 Wheat plasma membrane 66.55 61.37
Zm00001d042851_P003 Maize golgi, plasma membrane, plastid 70.27 58.59
HORVU3Hr1G085630.8 Barley plastid 65.54 55.11
Protein Annotations
EnsemblPlants:Bra000029.1EnsemblPlants:Bra000029.1-PEnsemblPlantsGene:Bra000029GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sphingomyelin_synth-like_domPANTHER:PTHR21290PANTHER:PTHR21290:SF33PFAM:PF14360TMHMM:TMhelixUniParc:UPI000254001A
UniProt:M4C751MapMan:5.4.13.1::::
Description
AT2G37940 (E=1e-165) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 316 Blast hits to 316 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Coordinates
chrA03:+:8909057..8912540
Molecular Weight (calculated)
34023.8 Da
IEP (calculated)
9.296
GRAVY (calculated)
0.205
Length
296 amino acids
Sequence
(BLAST)
001: MLWRRFCSEI STELVLLAEN WKYLLAGLIC QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI LKSKKIYTVL
101: IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVAR LPWPKSPLEI LEINPHGVMY GCGDLIFSSH MIFTLVFVLT YHKYGTKRFI KLFGWLTAFV
201: HSLLIIASRK HYTVDVVVAW YTVNLVVFCL DKKLPELPDR TTVLLPVVSK DRTKEENHKL LLNGNGIDPA DWRPRAQVNG KIDSNGVHFD NSLNGA
Best Arabidopsis Sequence Match ( AT2G37940.2 )
(BLAST)
001: MTLYIRRESS KLWKRFCSEI STEIGLLAEN WKYLLAGLIC QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI
101: LKTKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVSR LPWPKSALEV LEINPHGVMY GCGDLIFSSH MIFTLVFVRT YQKYGTKRFI
201: KLFGWLTAIV QSLLIIASRK HYSVDVVVAW YTVNLVVFCL DKKLPELPDR TAVLLPVISK DRTKEENHKL LNGNGVDPAD WRPRAQVNGK IDSNGVHTDN
301: TMNGA
Arabidopsis Description
IPCS2ERH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV03]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.