Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57298 | Soybean | mitochondrion | 79.1 | 35.1 |
| KRH57296 | Soybean | mitochondrion | 79.1 | 35.1 |
| KRH57294 | Soybean | mitochondrion | 79.1 | 35.1 |
| KRH04022 | Soybean | nucleus | 79.1 | 35.1 |
| AT4G00100.1 | Thale cress | cytosol, mitochondrion | 77.61 | 34.44 |
| PGSC0003DMT400070434 | Potato | mitochondrion | 77.61 | 34.44 |
| PGSC0003DMT400066770 | Potato | mitochondrion | 77.61 | 34.44 |
| PGSC0003DMT400059239 | Potato | mitochondrion | 77.61 | 34.44 |
| PGSC0003DMT400024801 | Potato | mitochondrion | 77.61 | 34.44 |
| PGSC0003DMT400017986 | Potato | mitochondrion | 77.61 | 34.44 |
| CDY57102 | Canola | mitochondrion | 77.61 | 34.44 |
| CDY51811 | Canola | mitochondrion | 77.61 | 34.44 |
| CDY48375 | Canola | mitochondrion | 77.61 | 34.44 |
| CDY37034 | Canola | mitochondrion | 77.61 | 34.44 |
| Bra007556.1-P | Field mustard | mitochondrion | 77.61 | 34.44 |
| Bra014472.1-P | Field mustard | mitochondrion | 77.61 | 34.44 |
| CDY41142 | Canola | mitochondrion | 77.61 | 34.44 |
| Bra004901.1-P | Field mustard | mitochondrion | 77.61 | 34.44 |
| Bra003427.1-P | Field mustard | mitochondrion | 77.61 | 34.44 |
| AT3G60770.1 | Thale cress | cytosol, mitochondrion | 77.61 | 34.44 |
| Bra040316.1-P | Field mustard | mitochondrion | 77.61 | 34.44 |
| CDX67841 | Canola | extracellular | 77.61 | 34.44 |
| CDX74731 | Canola | mitochondrion | 77.61 | 34.44 |
| CDX89075 | Canola | cytosol, mitochondrion | 77.61 | 34.44 |
| CDX71784 | Canola | cytosol, mitochondrion | 76.12 | 33.77 |
| VIT_15s0048g00670.t01 | Wine grape | mitochondrion | 76.12 | 33.77 |
| VIT_16s0022g01590.t01 | Wine grape | mitochondrion | 74.63 | 33.11 |
| CDY56728 | Canola | cytosol, mitochondrion | 77.61 | 32.91 |
| TraesCS7D01G313300.1 | Wheat | cytosol, mitochondrion | 73.13 | 32.45 |
| TraesCS7D01G313200.1 | Wheat | cytosol, mitochondrion | 73.13 | 32.45 |
| TraesCS7B01G217400.1 | Wheat | golgi | 73.13 | 32.45 |
| TraesCS7B01G217300.1 | Wheat | cytosol, mitochondrion | 73.13 | 32.45 |
| TraesCS7A01G316800.1 | Wheat | cytosol, mitochondrion | 73.13 | 32.45 |
| TraesCS7A01G316200.1 | Wheat | cytosol, mitochondrion | 73.13 | 32.45 |
| Zm00001d035094_P001 | Maize | mitochondrion | 73.13 | 32.45 |
| Zm00001d049666_P001 | Maize | mitochondrion | 73.13 | 32.45 |
| Os08t0117300-01 | Rice | nucleus | 73.13 | 32.45 |
| EES14427 | Sorghum | mitochondrion | 73.13 | 32.45 |
| EES14430 | Sorghum | mitochondrion | 73.13 | 32.45 |
| Os08t0117200-00 | Rice | nucleus | 73.13 | 31.01 |
| GSMUA_Achr6P01570_001 | Banana | mitochondrion | 68.66 | 30.26 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 65.67 | 29.14 |
| CDX74728 | Canola | endoplasmic reticulum, extracellular | 77.61 | 28.42 |
| TraesCS2A01G184000.1 | Wheat | cytosol | 62.69 | 27.81 |
| TraesCS2B01G223400.1 | Wheat | cytosol | 62.69 | 27.81 |
| TraesCS2D01G203800.1 | Wheat | cytosol | 62.69 | 27.81 |
| Os07t0572900-01 | Rice | mitochondrion | 61.19 | 27.15 |
| EER97417 | Sorghum | cytosol, mitochondrion | 61.19 | 27.15 |
| HORVU7Hr1G075290.2 | Barley | plastid | 73.13 | 27.07 |
| Zm00001d049668_P001 | Maize | cytosol, mitochondrion | 73.13 | 26.78 |
| HORVU7Hr1G075250.1 | Barley | plasma membrane | 73.13 | 26.63 |
| GSMUA_Achr1P16660_001 | Banana | plastid | 70.15 | 25.41 |
| Solyc12g077580.1.1 | Tomato | endoplasmic reticulum, extracellular | 44.78 | 22.73 |
| Os02t0677800-01 | Rice | mitochondrion | 4.48 | 2.73 |
| HORVU2Hr1G037940.1 | Barley | cytosol | 7.46 | 2.37 |
Protein Annotations
| Gene3D:1.10.287.10 | MapMan:35.1 | EMBL:ACUP02010119 | EnsemblPlantsGene:GLYMA_16G115100 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0022627 | GO:GO:0030529 | GO:GO:0070181 | UniProt:K7MGQ2 | EnsemblPlants:KRH07853 | ProteinID:KRH07853 |
| ProteinID:KRH07853.1 | PFAM:PF00312 | ScanProsite:PS00362 | PANTHER:PTHR11885 | PANTHER:PTHR11885:SF13 | InterPro:Ribosomal_S15 |
| InterPro:Ribosomal_S15P | InterPro:S15_NS1_RNA-bd | SMART:SM01387 | SUPFAM:SSF47060 | UniParc:UPI0002950E72 | : |
Description
hypothetical protein
Coordinates
chr16:+:25514647..25514850
Molecular Weight (calculated)
8117.2 Da
IEP (calculated)
10.807
GRAVY (calculated)
-0.539
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MLHISGPEPK IPEDLYHLIK KAVSIRKHLE RNKKDKDSKF RLILVDSRIY RLARYYNKTK KLLLVWV
001: MGRMHSRGKG ISASALPYKR SSPSWLKTTS QDVDESICKF AKKGLTPSQI GVILRDSHGI PQVKSVTGSK ILRILKAHGL APEIPEDLYH LIKKAVAIRK
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YESTTASTLV A
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YESTTASTLV A
Arabidopsis Description
RPS13B40S ribosomal protein S13-2 [Source:UniProtKB/Swiss-Prot;Acc:P59224]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.