Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014472.1-P | Field mustard | mitochondrion | 89.87 | 94.04 |
| CDX67841 | Canola | extracellular | 89.87 | 94.04 |
| CDY48375 | Canola | mitochondrion | 89.87 | 94.04 |
| CDY41142 | Canola | mitochondrion | 89.87 | 94.04 |
| CDX71784 | Canola | cytosol, mitochondrion | 89.24 | 93.38 |
| CDX89075 | Canola | cytosol, mitochondrion | 89.24 | 93.38 |
| CDY51811 | Canola | mitochondrion | 86.71 | 90.73 |
| AT3G60770.1 | Thale cress | cytosol, mitochondrion | 86.71 | 90.73 |
| CDY57102 | Canola | mitochondrion | 86.71 | 90.73 |
| CDY37034 | Canola | mitochondrion | 86.71 | 90.73 |
| CDX74731 | Canola | mitochondrion | 86.71 | 90.73 |
| PGSC0003DMT400017986 | Potato | mitochondrion | 82.91 | 86.75 |
| KRH57298 | Soybean | mitochondrion | 82.28 | 86.09 |
| PGSC0003DMT400070434 | Potato | mitochondrion | 82.28 | 86.09 |
| PGSC0003DMT400066770 | Potato | mitochondrion | 82.28 | 86.09 |
| PGSC0003DMT400059239 | Potato | mitochondrion | 82.28 | 86.09 |
| PGSC0003DMT400024801 | Potato | mitochondrion | 82.28 | 86.09 |
| VIT_15s0048g00670.t01 | Wine grape | mitochondrion | 82.28 | 86.09 |
| KRH57296 | Soybean | mitochondrion | 82.28 | 86.09 |
| KRH57294 | Soybean | mitochondrion | 82.28 | 86.09 |
| KRH04022 | Soybean | nucleus | 82.28 | 86.09 |
| VIT_16s0022g01590.t01 | Wine grape | mitochondrion | 79.75 | 83.44 |
| TraesCS7A01G316200.1 | Wheat | cytosol, mitochondrion | 77.22 | 80.79 |
| TraesCS7A01G316800.1 | Wheat | cytosol, mitochondrion | 77.22 | 80.79 |
| TraesCS7B01G217300.1 | Wheat | cytosol, mitochondrion | 77.22 | 80.79 |
| TraesCS7B01G217400.1 | Wheat | golgi | 77.22 | 80.79 |
| TraesCS7D01G313200.1 | Wheat | cytosol, mitochondrion | 77.22 | 80.79 |
| Os08t0117300-01 | Rice | nucleus | 77.22 | 80.79 |
| TraesCS7D01G313300.1 | Wheat | cytosol, mitochondrion | 77.22 | 80.79 |
| Zm00001d049666_P001 | Maize | mitochondrion | 76.58 | 80.13 |
| EES14427 | Sorghum | mitochondrion | 76.58 | 80.13 |
| Zm00001d035094_P001 | Maize | mitochondrion | 75.95 | 79.47 |
| EES14430 | Sorghum | mitochondrion | 75.95 | 79.47 |
| GSMUA_Achr6P01570_001 | Banana | mitochondrion | 74.68 | 77.63 |
| KRH07853 | Soybean | cytosol | 32.91 | 77.61 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 72.78 | 76.16 |
| Os08t0117200-00 | Rice | nucleus | 73.42 | 73.42 |
| HORVU7Hr1G075290.2 | Barley | plastid | 77.22 | 67.4 |
| HORVU7Hr1G075250.1 | Barley | plasma membrane | 77.22 | 66.3 |
| Zm00001d049668_P001 | Maize | cytosol, mitochondrion | 76.58 | 66.12 |
| TraesCS2D01G203800.1 | Wheat | cytosol | 62.66 | 65.56 |
| TraesCS2B01G223400.1 | Wheat | cytosol | 62.66 | 65.56 |
| TraesCS2A01G184000.1 | Wheat | cytosol | 62.66 | 65.56 |
| GSMUA_Achr1P16660_001 | Banana | plastid | 75.95 | 64.86 |
| Os07t0572900-01 | Rice | mitochondrion | 61.39 | 64.24 |
| EER97417 | Sorghum | cytosol, mitochondrion | 60.13 | 62.91 |
| CDX74728 | Canola | endoplasmic reticulum, extracellular | 72.15 | 62.3 |
| Os02t0677800-01 | Rice | mitochondrion | 31.01 | 44.55 |
| Solyc12g077580.1.1 | Tomato | endoplasmic reticulum, extracellular | 32.91 | 39.39 |
| HORVU2Hr1G037940.1 | Barley | cytosol | 29.11 | 21.8 |
Protein Annotations
| Gene3D:1.10.287.10 | Gene3D:1.10.8.1030 | MapMan:17.1.3.1.14 | GO:A0A078J317 | UniProt:A0A078J317 | EnsemblPlants:CDY56728 |
| ProteinID:CDY56728 | ProteinID:CDY56728.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00019966001 |
| HAMAP:MF_01343_A | PFAM:PF00312 | PFAM:PF08069 | ScanProsite:PS00362 | PANTHER:PTHR11885 | PANTHER:PTHR11885:SF7 |
| InterPro:Ribosomal_S13/S15_N | InterPro:Ribosomal_S15 | InterPro:Ribosomal_S15P | InterPro:S15_NS1_RNA-bd | SMART:SM01386 | SMART:SM01387 |
| SUPFAM:SSF47060 | UniParc:UPI0004EE2CB2 | : | : | : | : |
Description
BnaCnng31130DBnaCnng31130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J317]
Coordinates
chrLK033514:-:45755..46949
Molecular Weight (calculated)
18061.3 Da
IEP (calculated)
11.014
GRAVY (calculated)
-0.623
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLHSKGKG ISASALPYKR SPPSWLKTTS QDVDESICKF AKKGLTPSQI GVILRDSHGI PQVKSVTGNK ILRILKAHGL APEIPEDLYH LIKKAVAIRK
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YQYDTKRPKS PISITSEI
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YQYDTKRPKS PISITSEI
001: MGRMHSRGKG ISASALPYKR SSPSWLKTTP QDVDESICKF AKKGLTPSQI GVILRDSHGI PQVKSVTGSK ILRILKAHGL APEIPEDLYH LIKKAVAIRK
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YESTTASTLV A
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YESTTASTLV A
Arabidopsis Description
RPS13A40S ribosomal protein S13-1 [Source:UniProtKB/Swiss-Prot;Acc:P59223]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.