CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035094_P001	Maize	mitochondrion	98.68	98.68
EES14427	Sorghum	mitochondrion	98.68	98.68
Os08t0117300-01	Rice	nucleus	96.69	96.69
TraesCS7D01G313300.1	Wheat	cytosol, mitochondrion	95.36	95.36
TraesCS7B01G217400.1	Wheat	golgi	95.36	95.36
TraesCS7A01G316800.1	Wheat	cytosol, mitochondrion	95.36	95.36
VIT_15s0048g00670.t01	Wine grape	mitochondrion	88.74	88.74
Solyc05g051000.2.1	Tomato	nucleus	88.08	88.08
PGSC0003DMT400017986	Potato	mitochondrion	88.08	88.08
CDY57102	Canola	mitochondrion	88.08	88.08
CDY51811	Canola	mitochondrion	88.08	88.08
CDY37034	Canola	mitochondrion	88.08	88.08
CDX74731	Canola	mitochondrion	88.08	88.08
Bra040316.1-P	Field mustard	mitochondrion	88.08	88.08
Bra004901.1-P	Field mustard	mitochondrion	88.08	88.08
Solyc10g018250.1.1	Tomato	mitochondrion	87.42	87.42
Solyc03g083530.2.1	Tomato	mitochondrion	87.42	87.42
Solyc01g091220.2.1	Tomato	mitochondrion	87.42	87.42
Solyc11g072260.1.1	Tomato	nucleus	87.42	87.42
PGSC0003DMT400070434	Potato	mitochondrion	87.42	87.42
PGSC0003DMT400066770	Potato	mitochondrion	87.42	87.42
PGSC0003DMT400059239	Potato	mitochondrion	87.42	87.42
PGSC0003DMT400024801	Potato	mitochondrion	87.42	87.42
Os08t0117200-00	Rice	nucleus	91.39	87.34
KRH04022	Soybean	nucleus	86.75	86.75
VIT_16s0022g01590.t01	Wine grape	mitochondrion	86.75	86.75
KRH57298	Soybean	mitochondrion	86.75	86.75
KRH57294	Soybean	mitochondrion	86.75	86.75
AT4G00100.1	Thale cress	cytosol, mitochondrion	86.75	86.75
AT3G60770.1	Thale cress	cytosol, mitochondrion	86.75	86.75
KRH57296	Soybean	mitochondrion	86.75	86.75
CDY41142	Canola	mitochondrion	85.43	85.43
Bra003427.1-P	Field mustard	mitochondrion	85.43	85.43
Bra007556.1-P	Field mustard	mitochondrion	85.43	85.43
Bra014472.1-P	Field mustard	mitochondrion	85.43	85.43
CDX67841	Canola	extracellular	85.43	85.43
CDX89075	Canola	cytosol, mitochondrion	85.43	85.43
CDY48375	Canola	mitochondrion	85.43	85.43
CDX71784	Canola	cytosol, mitochondrion	84.77	84.77
GSMUA_Achr6P01570_001	Banana	mitochondrion	81.46	80.92
GSMUA_AchrUn_...	Banana	mitochondrion	80.13	80.13
HORVU7Hr1G075290.2	Barley	plastid	95.36	79.56
CDY56728	Canola	cytosol, mitochondrion	79.47	75.95
EER97417	Sorghum	cytosol, mitochondrion	73.51	73.51
KRH07853	Soybean	cytosol	32.45	73.13
GSMUA_Achr1P16660_001	Banana	plastid	82.12	67.03
CDX74728	Canola	endoplasmic reticulum, extracellular	72.19	59.56
Os02t0677800-01	Rice	mitochondrion	37.75	51.82
Solyc12g077580.1.1	Tomato	endoplasmic reticulum, extracellular	33.77	38.64

Protein Annotations

Gene3D:1.10.287.10	Gene3D:1.10.8.1030	MapMan:17.1.3.1.14	EntrezGene:8066106	UniProt:C5YMD1	EnsemblPlants:EES14430
ProteinID:EES14430	ProteinID:EES14430.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022627	GO:GO:0030529
GO:GO:0070181	HAMAP:MF_01343_A	PFAM:PF00312	PFAM:PF08069	ScanProsite:PS00362	PANTHER:PTHR11885
PANTHER:PTHR11885:SF7	InterPro:Ribosomal_S13/S15_N	InterPro:Ribosomal_S15	InterPro:Ribosomal_S15P	InterPro:S15_NS1_RNA-bd	SMART:SM01386
SMART:SM01387	EnsemblPlantsGene:SORBI_3007G019400	SUPFAM:SSF47060	unigene:Sbi.15759	UniParc:UPI00018C6871	RefSeq:XP_002444935.1

Description

hypothetical protein

Coordinates

chr7:-:1823603..1825579

Molecular Weight (calculated)

17172.3 Da

IEP (calculated)

11.215

GRAVY (calculated)

-0.480

Length

151 amino acids

Sequence
(BLAST)

001: MGRMHSRGKG ISSSALPYKR TPPTWLKTAA TEVEEMITKA AKKGQMPSQI GVLLRDQHGI PLVKSVTGSK ILRILKAHGL APEIPEDLYF LIKKAVAIRK
101: HLERNRKDKD SKFRLILVES RIHRLARYYK RTKKLPPTWK YESTTASTLV A

Best Arabidopsis Sequence Match ( AT4G00100.1 )
(BLAST)

001: MGRMHSRGKG ISASALPYKR SSPSWLKTTS QDVDESICKF AKKGLTPSQI GVILRDSHGI PQVKSVTGSK ILRILKAHGL APEIPEDLYH LIKKAVAIRK
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YESTTASTLV A

Arabidopsis Description

RPS13B40S ribosomal protein S13-2 [Source:UniProtKB/Swiss-Prot;Acc:P59224]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.