Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G184000.1 | Wheat | cytosol | 80.13 | 80.13 |
| TraesCS2D01G203800.1 | Wheat | cytosol | 79.47 | 79.47 |
| TraesCS2B01G223400.1 | Wheat | cytosol | 78.81 | 78.81 |
| EER97417 | Sorghum | cytosol, mitochondrion | 77.48 | 77.48 |
| Os08t0117300-01 | Rice | nucleus | 73.51 | 73.51 |
| CDY37034 | Canola | mitochondrion | 70.2 | 70.2 |
| PGSC0003DMT400017986 | Potato | mitochondrion | 70.2 | 70.2 |
| CDY57102 | Canola | mitochondrion | 70.2 | 70.2 |
| CDY51811 | Canola | mitochondrion | 70.2 | 70.2 |
| Solyc05g051000.2.1 | Tomato | nucleus | 70.2 | 70.2 |
| CDX74731 | Canola | mitochondrion | 70.2 | 70.2 |
| Bra040316.1-P | Field mustard | mitochondrion | 70.2 | 70.2 |
| Bra004901.1-P | Field mustard | mitochondrion | 70.2 | 70.2 |
| Solyc10g018250.1.1 | Tomato | mitochondrion | 69.54 | 69.54 |
| AT4G00100.1 | Thale cress | cytosol, mitochondrion | 69.54 | 69.54 |
| Solyc03g083530.2.1 | Tomato | mitochondrion | 69.54 | 69.54 |
| Solyc01g091220.2.1 | Tomato | mitochondrion | 69.54 | 69.54 |
| Solyc11g072260.1.1 | Tomato | nucleus | 69.54 | 69.54 |
| PGSC0003DMT400070434 | Potato | mitochondrion | 69.54 | 69.54 |
| PGSC0003DMT400066770 | Potato | mitochondrion | 69.54 | 69.54 |
| PGSC0003DMT400059239 | Potato | mitochondrion | 69.54 | 69.54 |
| PGSC0003DMT400024801 | Potato | mitochondrion | 69.54 | 69.54 |
| VIT_15s0048g00670.t01 | Wine grape | mitochondrion | 69.54 | 69.54 |
| VIT_16s0022g01590.t01 | Wine grape | mitochondrion | 69.54 | 69.54 |
| AT3G60770.1 | Thale cress | cytosol, mitochondrion | 69.54 | 69.54 |
| KRH57294 | Soybean | mitochondrion | 68.87 | 68.87 |
| Bra003427.1-P | Field mustard | mitochondrion | 68.87 | 68.87 |
| Bra007556.1-P | Field mustard | mitochondrion | 68.87 | 68.87 |
| Bra014472.1-P | Field mustard | mitochondrion | 68.87 | 68.87 |
| CDX67841 | Canola | extracellular | 68.87 | 68.87 |
| CDX89075 | Canola | cytosol, mitochondrion | 68.87 | 68.87 |
| CDY41142 | Canola | mitochondrion | 68.87 | 68.87 |
| CDY48375 | Canola | mitochondrion | 68.87 | 68.87 |
| KRH04022 | Soybean | nucleus | 68.87 | 68.87 |
| KRH57298 | Soybean | mitochondrion | 68.87 | 68.87 |
| KRH57296 | Soybean | mitochondrion | 68.87 | 68.87 |
| CDX71784 | Canola | cytosol, mitochondrion | 68.21 | 68.21 |
| Os08t0117200-00 | Rice | nucleus | 69.54 | 66.46 |
| GSMUA_Achr6P01570_001 | Banana | mitochondrion | 66.89 | 66.45 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 63.58 | 63.58 |
| CDY56728 | Canola | cytosol, mitochondrion | 64.24 | 61.39 |
| KRH07853 | Soybean | cytosol | 27.15 | 61.19 |
| GSMUA_Achr1P16660_001 | Banana | plastid | 65.56 | 53.51 |
| CDX74728 | Canola | endoplasmic reticulum, extracellular | 58.94 | 48.63 |
| Os02t0677800-01 | Rice | mitochondrion | 24.5 | 33.64 |
| Solyc12g077580.1.1 | Tomato | endoplasmic reticulum, extracellular | 29.14 | 33.33 |
| HORVU2Hr1G037940.1 | Barley | cytosol | 37.09 | 26.54 |
Protein Annotations
| Gene3D:1.10.287.10 | Gene3D:1.10.8.1030 | MapMan:17.1.3.1.14 | EntrezGene:4343679 | EMBL:AK063015 | ProteinID:BAC83147.1 |
| ProteinID:BAF21976.1 | ProteinID:BAT02253.1 | ProteinID:EEE67448.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022627 |
| GO:GO:0070181 | HAMAP:MF_01343_A | EnsemblPlantsGene:Os07g0572900 | EnsemblPlants:Os07t0572900-01 | PFAM:PF00312 | PFAM:PF08069 |
| ScanProsite:PS00362 | PANTHER:PTHR11885 | PANTHER:PTHR11885:SF8 | UniProt:Q6ZL24 | InterPro:Ribosomal_S13/S15_N | InterPro:Ribosomal_S15 |
| InterPro:Ribosomal_S15P | InterPro:S15_NS1_RNA-bd | SMART:SM01386 | SMART:SM01387 | SUPFAM:SSF47060 | UniParc:UPI00001BF211 |
| RefSeq:XP_015647041.1 | : | : | : | : | : |
Description
Similar to 40S ribosomal protein S13. (Os07t0572900-01)
Coordinates
chr7:+:23153184..23154093
Molecular Weight (calculated)
16935.0 Da
IEP (calculated)
11.192
GRAVY (calculated)
-0.236
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRMHSSGKG MSCSVLPYRR AAPAWVKTSA SEVEEMIVRV AKKGQLPSQI GAILRDAHAV PLAQGVTGGK ILRVLKSRGL APEVPEDLYF LIKKAVAMRK
101: HLERNRKDKD TKFRLILVES RVHRLTRYYR LAKKIPAFFK YDSTTASTLV A
101: HLERNRKDKD TKFRLILVES RVHRLTRYYR LAKKIPAFFK YDSTTASTLV A
001: MGRMHSRGKG ISASALPYKR SSPSWLKTTS QDVDESICKF AKKGLTPSQI GVILRDSHGI PQVKSVTGSK ILRILKAHGL APEIPEDLYH LIKKAVAIRK
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YESTTASTLV A
101: HLERNRKDKD SKFRLILVES RIHRLARYYK KTKKLPPVWK YESTTASTLV A
Arabidopsis Description
RPS13B40S ribosomal protein S13-2 [Source:UniProtKB/Swiss-Prot;Acc:P59224]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.