Factsheet for Os07t0223700-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 7
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0643000-01
Os04t0534400-01
Os08t0156700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55535.1	Os02t0643000-01	AT3G60600.1	21798944
AT1G55535.1	Os04t0534400-01	AT3G60600.1	21798944
AT1G55535.1	Os08t0156700-01	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G242700.1	Wheat	plasma membrane	69.58	85.32
TraesCS2B01G262900.1	Wheat	plasma membrane	68.61	84.13
EER96079	Sorghum	extracellular, mitochondrion, plasma membrane, plastid	68.28	84.06
Zm00001d019194_P004	Maize	plasma membrane	67.64	83.27
Zm00001d005229_P001	Maize	plasma membrane	64.08	83.19
Bra037108.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	20.39	64.29
GSMUA_Achr4P02350_001	Banana	plasma membrane	50.16	62.75
VIT_06s0004g00110.t01	Wine grape	mitochondrion	45.31	57.14
TraesCS2A01G244700.1	Wheat	plasma membrane	62.14	56.97
Solyc01g050070.2.1	Tomato	extracellular, plasma membrane, vacuole	40.45	56.82
KRH50507	Soybean	extracellular, mitochondrion, plasma membrane, vacuole	41.42	51.2
KRG89467	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	40.78	50.6
CDY26095	Canola	extracellular, mitochondrion, plasma membrane, vacuole	39.48	49.39
GSMUA_Achr4P10280_001	Banana	plasma membrane	47.9	49.01
CDY56020	Canola	extracellular, mitochondrion, plasma membrane, vacuole	39.81	48.05
Bra030853.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	40.13	47.69
CDY08251	Canola	extracellular, mitochondrion, plasma membrane, vacuole	39.16	47.64
AT1G55535.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	39.16	46.54
AT3G13420.3	Thale cress	mitochondrion	38.19	44.7
CDY10553	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	40.13	38.87
CDY43992	Canola	mitochondrion, plasma membrane	35.92	37.25
Bra027437.1-P	Field mustard	mitochondrion, plasma membrane	35.92	37.25

Protein Annotations

EnsemblPlants:Os07t0223700-00	EnsemblPlantsGene:Os07g0223700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	ProteinID:BAT00666.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000393BFF9	UniProt:A0A0N7KN54	MapMan:35.2	:

Description

Similar to predicted protein. (Os07t0223700-00)

Coordinates

chr7:+:6841477..6844677

Molecular Weight (calculated)

34041.2 Da

IEP (calculated)

7.876

GRAVY (calculated)

0.399

Length

309 amino acids

Sequence
(BLAST)

001: MRSCCCCCPC PAALGIGIGP RLRSFLRDYD ALQSLALALI YLQIGCALIG SLGALFNGVL VINLVIGLFA VVAIESSSQT LGRTYAVLLF FAIVLDVAWF
101: ILFSHAIWNI TPEEKYGQLF VLSLKLALWM QIIGFSVRFL SSFIWIQMYR LGVSSSTPTY HEVNYDGRNS FLSPRSSSVR RNSMADDILG GSIYDPAYYS
201: SLFADVRNNT CTHQGDKQSG SNDSGSTSAG QSPRLKSFAS RSFVANDVSL CLIFNHNVIN TFLDFYNPII YVENPGFLMS LGRTFSVSFK LGLILQIDEG
301: STCLKYNLS

Best Arabidopsis Sequence Match ( AT1G55535.1 )
(BLAST)

001: MMLCGSLRDR IHPWLRDYVK LQSLAVFLIY AQIGCALIGS LGALYNGVLL INLAIALFAL VAIESNSQSL GRTYAVLLFC ALLLDISWFI LFTEEIWSIS
101: AETYGTFFIF SVKLTMAMEM IGFFVRLSSS LLWFQIYRLG AAIVDTSLPR ETDSDLRNSF LNPPTPAIAR QCSGAEEILG GSIYDPAYYT SLFEESQTNI
201: NSPKATQVNH YSAGNNGSPS AAEASHIKSP IFRSLHSIDE EKGLKKPEEM CLKQTGMASI

Arabidopsis Description

At1g55535 [Source:UniProtKB/TrEMBL;Acc:Q5XF13]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.