Factsheet for Solyc01g050070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037108.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	32.73	73.47
VIT_06s0004g00110.t01	Wine grape	mitochondrion	70.0	62.86
KRG89467	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	65.45	57.83
KRH50507	Soybean	extracellular, mitochondrion, plasma membrane, vacuole	65.45	57.6
CDY26095	Canola	extracellular, mitochondrion, plasma membrane, vacuole	60.0	53.44
CDY56020	Canola	extracellular, mitochondrion, plasma membrane, vacuole	61.82	53.12
Bra030853.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	62.73	53.08
CDY08251	Canola	extracellular, mitochondrion, plasma membrane, vacuole	60.91	52.76
AT1G55535.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	61.36	51.92
Zm00001d005229_P001	Maize	plasma membrane	55.0	50.84
GSMUA_Achr4P02350_001	Banana	plasma membrane	56.82	50.61
TraesCS2B01G262900.1	Wheat	plasma membrane	56.36	49.21
TraesCS2D01G242700.1	Wheat	plasma membrane	55.91	48.81
Zm00001d019194_P004	Maize	plasma membrane	54.55	47.81
EER96079	Sorghum	extracellular, mitochondrion, plasma membrane, plastid	54.55	47.81
AT3G13420.3	Thale cress	mitochondrion	57.27	47.73
CDY43992	Canola	mitochondrion, plasma membrane	57.73	42.62
Bra027437.1-P	Field mustard	mitochondrion, plasma membrane	57.73	42.62
CDY10553	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	61.36	42.32
GSMUA_Achr4P10280_001	Banana	plasma membrane	57.73	42.05
Os07t0223700-00	Rice	plasma membrane	56.82	40.45
TraesCS2A01G244700.1	Wheat	plasma membrane	54.09	35.31

Protein Annotations

EnsemblPlants:Solyc01g050070.2.1	EnsemblPlantsGene:Solyc01g050070.2	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR35471
TMHMM:TMhelix	UniParc:UPI000276353C	UniProt:K4AVI4	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1:-:48378530..48401186

Molecular Weight (calculated)

24155.2 Da

IEP (calculated)

4.619

GRAVY (calculated)

0.448

Length

220 amino acids

Sequence
(BLAST)

001: MLCSAFTTHI QTWLRDYDRI QSFAVILIYV QIGCALIGSL GALYNGVSLI NLGIGLFALV AIESSSQSLG RTYAVLLFSA ILVDISWFIL FASEIWNISS
101: GIYGTLVIFS VKLTLSMQII GFCVRLSSSL LWIQMYKLGV SYMDCSVPRE ADSDMRNSFL NPATPLTRQP SNSDDALGGS VYDPAYYSSL FEDGKDETYF
201: CRGSQNNGFV IGSPSMAKTI

Best Arabidopsis Sequence Match ( AT1G55535.3 )
(BLAST)

001: MMLCGSLRDR IHPWLRDYVK LQSLAVFLIY AQIGCALIGS LGALYNGVLL INLAIALFAL VAIESNSQSL GRTYAVLLFC ALLLDISWFI LFTEEIWSIS
101: AETYGTFFIF SVKLTMAMEM IGFFVRLSSS LLWFQIYRLG AAIVDTSLPR ETDSDLRNSF LNPPTPAIAR QCSGAEEILG GSIYDPAYYT SLFEESQTNI
201: NSPKATQVNH YSAGNNGSPS AAEASHIKSP IFRSLHSIDE EKGLKKPVSL H

Arabidopsis Description

At1g55535 [Source:UniProtKB/TrEMBL;Acc:Q5XF13]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.