Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 6
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr3P04120_001 | |
| GSMUA_Achr4P01630_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17760.1 | GSMUA_Achr10P... | AT4G26455.1 | 21798944 |
| AT2G17760.1 | GSMUA_Achr3P04120_001 | AT4G26455.1 | 21798944 |
| AT2G17760.1 | GSMUA_Achr4P01630_001 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P05070_001 | Banana | plasma membrane, vacuole | 48.54 | 55.8 |
| GSMUA_Achr1P07390_001 | Banana | extracellular, vacuole | 49.9 | 49.9 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 43.11 | 49.44 |
| GSMUA_Achr2P03530_001 | Banana | plasma membrane | 49.9 | 49.33 |
| TraesCS5B01G334700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.74 | 48.64 |
| Zm00001d022600_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 48.16 | 48.63 |
| EER99278 | Sorghum | extracellular, plasma membrane, vacuole | 49.13 | 48.37 |
| TraesCS5A01G335500.1 | Wheat | extracellular, plasma membrane, vacuole | 48.35 | 47.88 |
| TraesCS5D01G340300.1 | Wheat | extracellular, plasma membrane, vacuole | 48.35 | 47.88 |
| GSMUA_Achr1P07410_001 | Banana | cytosol | 13.01 | 47.86 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 40.58 | 47.5 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 26.6 | 44.77 |
| HORVU5Hr1G084490.1 | Barley | vacuole | 47.38 | 44.04 |
| Os09t0542100-01 | Rice | plasma membrane | 41.75 | 43.88 |
| GSMUA_Achr1P07400_001 | Banana | cytosol, plasma membrane, plastid | 13.59 | 43.75 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 42.14 | 43.14 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 42.33 | 42.58 |
| PGSC0003DMT400010765 | Potato | cytosol | 15.34 | 42.47 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 42.14 | 42.3 |
| Os06t0717900-02 | Rice | extracellular | 45.24 | 42.29 |
| KRH28845 | Soybean | vacuole | 41.36 | 41.93 |
| Solyc03g033360.1.1 | Tomato | plastid | 31.65 | 41.9 |
| KRH76603 | Soybean | vacuole | 41.16 | 41.73 |
| EER88970 | Sorghum | vacuole | 43.3 | 41.22 |
| CDY07819 | Canola | vacuole | 40.58 | 40.9 |
| Zm00001d014804_P001 | Maize | extracellular | 42.91 | 40.7 |
| Bra024490.1-P | Field mustard | vacuole | 40.19 | 40.51 |
| CDY29199 | Canola | vacuole | 40.19 | 40.51 |
| KRH07991 | Soybean | nucleus | 40.58 | 40.5 |
| TraesCS7D01G524300.1 | Wheat | plastid | 40.97 | 40.27 |
| HORVU7Hr1G118020.3 | Barley | extracellular, plasma membrane, vacuole | 41.75 | 40.04 |
| TraesCS7A01G537200.1 | Wheat | plasma membrane | 41.16 | 39.63 |
| PGSC0003DMT400058018 | Potato | vacuole | 41.94 | 39.49 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 40.97 | 39.15 |
| Solyc02g083460.2.1 | Tomato | extracellular | 40.97 | 39.15 |
| Bra036814.1-P | Field mustard | vacuole | 36.7 | 39.13 |
| CDX73727 | Canola | vacuole | 36.5 | 38.13 |
| CDX78000 | Canola | vacuole | 37.09 | 37.9 |
| AT3G51360.9 | Thale cress | vacuole | 36.12 | 37.35 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 42.91 | 36.65 |
| Zm00001d036037_P001 | Maize | vacuole | 40.78 | 36.46 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 37.09 | 36.11 |
| EER89124 | Sorghum | extracellular, vacuole | 39.42 | 35.3 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 21.36 | 35.26 |
| Bra013063.1-P | Field mustard | plasma membrane | 19.61 | 34.83 |
| KRH69733 | Soybean | nucleus | 40.58 | 34.72 |
| CDY29013 | Canola | plasma membrane | 35.92 | 34.64 |
| CDX73728 | Canola | vacuole | 36.12 | 34.57 |
| CDX77999 | Canola | vacuole | 35.53 | 34.14 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 34.95 | 34.09 |
| CDX90651 | Canola | plasma membrane | 35.34 | 34.08 |
| Bra036815.1-P | Field mustard | vacuole | 35.73 | 33.95 |
| Bra012857.1-P | Field mustard | plasma membrane | 28.93 | 33.04 |
| GSMUA_Achr10P... | Banana | plasma membrane, vacuole | 33.59 | 32.58 |
| GSMUA_Achr5P22890_001 | Banana | endoplasmic reticulum, plasma membrane | 32.82 | 32.56 |
| AT3G51340.1 | Thale cress | plasma membrane | 33.4 | 32.45 |
| GSMUA_Achr6P27900_001 | Banana | golgi, vacuole | 21.55 | 22.93 |
| GSMUA_Achr6P29770_001 | Banana | extracellular, plasma membrane, vacuole | 22.14 | 22.75 |
| GSMUA_Achr3P19030_001 | Banana | vacuole | 18.45 | 22.73 |
| GSMUA_Achr3P17250_001 | Banana | plasma membrane, vacuole | 21.36 | 22.68 |
| GSMUA_Achr2P17680_001 | Banana | vacuole | 21.94 | 22.65 |
| GSMUA_Achr8P15150_001 | Banana | extracellular, plasma membrane, vacuole | 21.55 | 21.76 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 17.86 | 21.25 |
| GSMUA_Achr6P17740_001 | Banana | extracellular | 18.25 | 20.8 |
| GSMUA_Achr3P18830_001 | Banana | cytosol | 19.03 | 17.13 |
| GSMUA_Achr4P14240_001 | Banana | cytosol, peroxisome, plastid | 18.64 | 17.08 |
| GSMUA_Achr4P07210_001 | Banana | cytosol, plastid, vacuole | 18.06 | 16.61 |
| GSMUA_Achr6P30620_001 | Banana | cytosol, nucleus, vacuole | 17.48 | 16.51 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_AchrUn_randomG16860_001 | EnsemblPlants:GSMUA_AchrUn_randomP16860_001 |
| EnsemblPlants:GSMUA_AchrUn_randomT16860_001 | InterPro:IPR021109 | InterPro:IPR033121 | UniProt:M0U9U5 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 |
| PFAM:PF14543 | PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF232 |
| InterPro:Pepsin-like_plant | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-TM | InterPro:TAXi_C | InterPro:TAXi_N |
| TMHMM:TMhelix | UniParc:UPI0002954DEB | SEG:seg | : | : | : |
Description
Putative Aspartic proteinase-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG16860_001]
Coordinates
chrchrUn_random:-:79225813..79230212
Molecular Weight (calculated)
56894.4 Da
IEP (calculated)
6.576
GRAVY (calculated)
-0.066
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSLHPFHH RYLLFLFIII GAASTVTVAA ALSLDLHHRF SDRVRKWEED HGLPGAWWPE KGTAEYAAAL APHDRVLHRR SLADGSVLTF ANGNATFWID
101: LPGFLYYAVV ELGTPNMTIL VALDTGSSLF WVPCSLTPVS NSFVFGILSF KLITDPGQSS TSQNVPCNSS FCDLRSKCSG ANSNCPYFVR YADDSSSLGI
201: LVEDVLYLRR EDATSKTVEA QITFGCSEYV EGMNMALPYG IFGLGMGNTS VPSILSSKGI ILDSFSMCFG VDGIGRINFG DKGSLDQEET PFNIDNRGFY
301: NISITGMEVG NTSIDSDFSV IVDSGTSFTY LPDPVYTKFT ESFNAQVQEN RHKPDNSLPF EFCYNSSSRY SFQRPNISLI AKGGSKFPVS HPMLMFIERQ
401: QNVYICCLAV FKSRGFNIIG QNFMTGLRVV FDREKLSLGW KKFDCYSTEN SSTRPLQNLS PAPSPGVAFE PSTSAEAPNP RSNHTQVVQT PRNRSSRSNS
501: KISIIMSLLF FWAVL
101: LPGFLYYAVV ELGTPNMTIL VALDTGSSLF WVPCSLTPVS NSFVFGILSF KLITDPGQSS TSQNVPCNSS FCDLRSKCSG ANSNCPYFVR YADDSSSLGI
201: LVEDVLYLRR EDATSKTVEA QITFGCSEYV EGMNMALPYG IFGLGMGNTS VPSILSSKGI ILDSFSMCFG VDGIGRINFG DKGSLDQEET PFNIDNRGFY
301: NISITGMEVG NTSIDSDFSV IVDSGTSFTY LPDPVYTKFT ESFNAQVQEN RHKPDNSLPF EFCYNSSSRY SFQRPNISLI AKGGSKFPVS HPMLMFIERQ
401: QNVYICCLAV FKSRGFNIIG QNFMTGLRVV FDREKLSLGW KKFDCYSTEN SSTRPLQNLS PAPSPGVAFE PSTSAEAPNP RSNHTQVVQT PRNRSSRSNS
501: KISIIMSLLF FWAVL
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.