Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17760.1 | EER96942 | AT4G26455.1 | 21798944 |
| AT2G17760.1 | EES14314 | AT4G26455.1 | 21798944 |
| AT2G17760.1 | OQU81760 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036037_P001 | Maize | vacuole | 82.61 | 82.47 |
| EER88970 | Sorghum | vacuole | 51.3 | 54.53 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 35.65 | 45.66 |
| PGSC0003DMT400010765 | Potato | cytosol | 14.43 | 44.62 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 38.78 | 44.33 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 38.96 | 43.75 |
| EER99278 | Sorghum | extracellular, plasma membrane, vacuole | 39.65 | 43.59 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 32.52 | 42.5 |
| CDY07819 | Canola | vacuole | 37.74 | 42.47 |
| CDY29199 | Canola | vacuole | 37.57 | 42.27 |
| Bra024490.1-P | Field mustard | vacuole | 37.57 | 42.27 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 37.57 | 42.11 |
| KXG25917 | Sorghum | vacuole | 37.74 | 41.97 |
| Solyc03g033360.1.1 | Tomato | plastid | 28.35 | 41.9 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 21.91 | 41.18 |
| KRH76603 | Soybean | vacuole | 36.35 | 41.14 |
| KRH28845 | Soybean | vacuole | 35.83 | 40.55 |
| PGSC0003DMT400058018 | Potato | vacuole | 38.09 | 40.04 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 37.22 | 39.7 |
| Solyc02g083460.2.1 | Tomato | extracellular | 37.22 | 39.7 |
| KRH07991 | Soybean | nucleus | 35.48 | 39.53 |
| GSMUA_AchrUn_... | Banana | vacuole | 35.3 | 39.42 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 21.22 | 39.1 |
| Bra013063.1-P | Field mustard | plasma membrane | 19.3 | 38.28 |
| CDX77999 | Canola | vacuole | 35.13 | 37.69 |
| Bra036815.1-P | Field mustard | vacuole | 35.48 | 37.64 |
| AT3G51360.9 | Thale cress | vacuole | 32.17 | 37.15 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 38.96 | 37.15 |
| CDY29013 | Canola | plasma membrane | 34.26 | 36.89 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 33.91 | 36.86 |
| CDX73728 | Canola | vacuole | 34.43 | 36.8 |
| CDX73727 | Canola | vacuole | 31.48 | 36.71 |
| CDX90651 | Canola | plasma membrane | 33.91 | 36.52 |
| Bra036814.1-P | Field mustard | vacuole | 30.61 | 36.44 |
| Bra012857.1-P | Field mustard | plasma membrane | 27.83 | 35.48 |
| CDX78000 | Canola | vacuole | 30.96 | 35.32 |
| KRH69733 | Soybean | nucleus | 36.35 | 34.72 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 31.65 | 34.47 |
| AT3G51340.1 | Thale cress | plasma membrane | 30.96 | 33.58 |
| KXG30744 | Sorghum | extracellular, vacuole | 30.09 | 33.33 |
| EES08111 | Sorghum | vacuole | 16.87 | 23.77 |
| EES09417 | Sorghum | plasma membrane, vacuole | 16.87 | 23.37 |
| EES14146 | Sorghum | plasma membrane | 19.83 | 23.12 |
| OQU84933 | Sorghum | extracellular, vacuole | 19.48 | 22.86 |
| KXG33497 | Sorghum | vacuole | 19.83 | 22.53 |
| EES09418 | Sorghum | endoplasmic reticulum, golgi, vacuole | 15.83 | 22.3 |
| KXG23105 | Sorghum | plasma membrane, vacuole | 17.74 | 22.27 |
| EES03170 | Sorghum | plasma membrane, vacuole | 18.78 | 22.09 |
| EES05585 | Sorghum | endoplasmic reticulum, peroxisome, plastid, vacuole | 17.91 | 18.49 |
| EER99637 | Sorghum | plasma membrane | 19.65 | 17.88 |
| KXG19766 | Sorghum | cytosol, plastid, vacuole | 15.83 | 17.37 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:8069062 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | UniProt:C5Z3B2 |
| EnsemblPlants:EER89124 | ProteinID:EER89124 | ProteinID:EER89124.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0030163 | InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 |
| PFAM:PF14543 | PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF232 |
| InterPro:Peptidase_aspartic_dom_sf | EnsemblPlantsGene:SORBI_3010G021700 | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N |
| TMHMM:TMhelix | UniParc:UPI0001A89A5A | RefSeq:XP_002437757.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:1731598..1734679
Molecular Weight (calculated)
60012.9 Da
IEP (calculated)
6.004
GRAVY (calculated)
0.050
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHCNLLVAI AAVVVLLFVA VVTTEASGGI GFNLHHRFSP VVRQWMVDAR GGGHGVPGSS WLLPEEAPAV GSPEYYSALL RHDRALFTRR RGLASAADGQ
101: STTLTFADGN ATRLDTYEYL HYAEVEVGTP SSKFLVALDT GSDLFWLPCE CKLCAKNGST MYSPSLSSTS KTVPCGHPLC ERPDACATAG KSSSSCPYEV
201: KYVSANTGSS GVLVEDVLHL VDGGGGGGGK AVQAPIVFGC GQVQTGAFLR GAAAGGLMGL GLDKVSVPSA LASSGLVASD SFSMCFSRDG VGRINFGDAG
301: SPDQAETPLI AAGSLQPSYY NISVGAITVD SKAMAVEFTA VVDSGTSFTY LDDPAYTFLT TNFNSRVSEA SETYGSGYEK FEFCYRLSPG QTSMKRLPAM
401: SLTTKGGAVF PITWPIIPVL ASTNGGPYHP IGYCLGIIKT SILSTEDATI GQNFMTGLKV VFDRRKSVLG WEKFDCYKDA KMQEGGSPDT SLGSPAAAAG
501: DSTPGSPSGD YAPSVPLPWE NNATNGPYYY PGRVPLTWPA RSGSGSGSGS SSRVSFGGLL SLILLHVLVV TSVTW
101: STTLTFADGN ATRLDTYEYL HYAEVEVGTP SSKFLVALDT GSDLFWLPCE CKLCAKNGST MYSPSLSSTS KTVPCGHPLC ERPDACATAG KSSSSCPYEV
201: KYVSANTGSS GVLVEDVLHL VDGGGGGGGK AVQAPIVFGC GQVQTGAFLR GAAAGGLMGL GLDKVSVPSA LASSGLVASD SFSMCFSRDG VGRINFGDAG
301: SPDQAETPLI AAGSLQPSYY NISVGAITVD SKAMAVEFTA VVDSGTSFTY LDDPAYTFLT TNFNSRVSEA SETYGSGYEK FEFCYRLSPG QTSMKRLPAM
401: SLTTKGGAVF PITWPIIPVL ASTNGGPYHP IGYCLGIIKT SILSTEDATI GQNFMTGLKV VFDRRKSVLG WEKFDCYKDA KMQEGGSPDT SLGSPAAAAG
501: DSTPGSPSGD YAPSVPLPWE NNATNGPYYY PGRVPLTWPA RSGSGSGSGS SSRVSFGGLL SLILLHVLVV TSVTW
001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
Arabidopsis Description
AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.