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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 1
  • vacuole 3
  • extracellular 2
  • endoplasmic reticulum 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH56393
KRH62532

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17760.1 KRH56393 AT4G26455.1 21798944
AT2G17760.1 KRH62532 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH07991 Soybean nucleus 78.74 91.86
KRH76603 Soybean vacuole 55.65 65.94
KRH28845 Soybean vacuole 55.15 65.35
VIT_00s0510g00050.t01 Wine grape plasma membrane, vacuole 27.74 54.58
CDY07819 Canola vacuole 44.52 52.45
Bra002086.1-P Field mustard extracellular, plasma membrane, vacuole 43.52 52.09
CDY29199 Canola vacuole 44.19 52.05
Bra024490.1-P Field mustard vacuole 44.19 52.05
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 43.69 51.27
CDY24371 Canola extracellular, plasma membrane, vacuole 43.36 50.98
PGSC0003DMT400010765 Potato cytosol 15.28 49.46
GSMUA_Achr4P05070_001 Banana plasma membrane, vacuole 35.88 48.21
PGSC0003DMT400009406 Potato plasma membrane, vacuole 42.86 47.87
Solyc02g083460.2.1 Tomato extracellular 42.86 47.87
Solyc03g033360.1.1 Tomato plastid 30.07 46.53
PGSC0003DMT400058018 Potato vacuole 40.86 44.97
CDY20815 Canola plasma membrane, plastid, vacuole 45.02 44.94
KRH69730 Soybean extracellular, plasma membrane, vacuole 38.87 44.66
CDY02252 Canola golgi, plasma membrane, vacuole 23.09 44.55
KRH07987 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.37 44.51
TraesCS2D01G065800.1 Wheat vacuole 37.54 44.31
TraesCS2B01G079700.1 Wheat vacuole 37.71 44.16
TraesCS5B01G334700.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.71 43.99
TraesCS2A01G067500.1 Wheat vacuole 37.38 43.86
GSMUA_Achr2P03530_001 Banana plasma membrane 37.87 43.76
GSMUA_Achr1P07390_001 Banana extracellular, vacuole 37.38 43.69
TraesCS5D01G340300.1 Wheat extracellular, plasma membrane, vacuole 37.54 43.46
TraesCS5A01G335500.1 Wheat extracellular, plasma membrane, vacuole 37.38 43.27
Zm00001d022600_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 36.54 43.14
Bra013063.1-P Field mustard plasma membrane 20.76 43.1
EER99278 Sorghum extracellular, plasma membrane, vacuole 37.21 42.83
Bra036814.1-P Field mustard vacuole 34.05 42.44
Os09t0542100-01 Rice plasma membrane 34.39 42.24
GSMUA_Achr1P07410_001 Banana cytosol 9.8 42.14
Os04t0228000-01 Rice extracellular, vacuole 36.88 41.89
KXG25917 Sorghum vacuole 35.88 41.78
AT3G51330.1 Thale cress extracellular, plasma membrane, vacuole 36.71 41.78
GSMUA_AchrUn_... Banana plasma membrane, vacuole 31.06 41.65
CDX73727 Canola vacuole 34.05 41.58
GSMUA_Achr1P07400_001 Banana cytosol, plasma membrane, plastid 10.96 41.25
Zm00001d004132_P001 Maize extracellular 35.38 41.12
CDX78000 Canola vacuole 34.22 40.87
HORVU5Hr1G084490.1 Barley vacuole 37.54 40.79
CDX90651 Canola plasma membrane 36.05 40.64
GSMUA_AchrUn_... Banana vacuole 34.72 40.58
AT3G51360.9 Thale cress vacuole 33.55 40.56
GSMUA_Achr7P03880_001 Banana extracellular 29.57 40.45
CDY29013 Canola plasma membrane 35.71 40.26
HORVU7Hr1G118020.3 Barley extracellular, plasma membrane, vacuole 35.88 40.22
TraesCS7D01G524300.1 Wheat plastid 34.88 40.08
Bra012857.1-P Field mustard plasma membrane 29.9 39.91
TraesCS7A01G537200.1 Wheat plasma membrane 35.38 39.81
Zm00001d014804_P001 Maize extracellular 35.71 39.59
Bra036815.1-P Field mustard vacuole 35.55 39.48
AT3G51350.1 Thale cress extracellular, plasma membrane, vacuole 34.55 39.39
Os06t0717900-02 Rice extracellular 36.05 39.38
CDX77999 Canola vacuole 35.05 39.37
CDX73728 Canola vacuole 34.88 39.03
EER88970 Sorghum vacuole 34.72 38.63
AT3G51340.1 Thale cress plasma membrane 32.72 37.17
Zm00001d036037_P001 Maize vacuole 35.22 36.81
EER89124 Sorghum extracellular, vacuole 34.72 36.35
KRG97610 Soybean golgi, plasma membrane, vacuole 28.24 32.69
KRH31262 Soybean extracellular, vacuole 27.57 31.86
KRH16653 Soybean plasma membrane 26.41 30.11
KRH18849 Soybean plasma membrane, vacuole 26.25 29.87
KRH32611 Soybean cytosol 8.47 26.84
KRH64665 Soybean vacuole 15.78 24.8
KRH00937 Soybean plasma membrane 19.27 24.12
KRH17969 Soybean vacuole 13.79 23.71
KRH63975 Soybean vacuole 17.11 23.41
KRH40286 Soybean golgi, plasma membrane, vacuole 19.27 23.39
KRH53961 Soybean vacuole 16.94 23.29
KRH40970 Soybean nucleus 16.45 22.97
KRH53249 Soybean vacuole 15.95 22.8
KRH64664 Soybean vacuole 15.78 22.57
KRH34227 Soybean plasma membrane 17.77 22.53
KRH25141 Soybean extracellular, plasma membrane, vacuole 18.44 22.42
KRG92565 Soybean cytosol 10.63 22.22
KRH26553 Soybean extracellular, plasma membrane, vacuole 18.11 22.11
KRH30533 Soybean extracellular 17.94 22.09
KRH59619 Soybean nucleus 15.78 22.04
KRH67797 Soybean extracellular, plasma membrane, vacuole 18.11 21.76
KRH22758 Soybean extracellular, plasma membrane, vacuole 17.61 21.63
KRH19985 Soybean extracellular, plasma membrane, vacuole 17.44 21.6
KRG96085 Soybean extracellular, plasma membrane, vacuole 17.94 21.51
KRH16379 Soybean plasma membrane, vacuole 16.11 21.46
KRH01533 Soybean mitochondrion, plasma membrane, vacuole 16.94 20.82
KRH45218 Soybean plasma membrane, vacuole 16.78 20.7
KRH39216 Soybean nucleus, peroxisome, vacuole 18.27 19.23
KRH48461 Soybean nucleus, peroxisome, vacuole 17.94 18.82
KRH04490 Soybean vacuole 16.45 15.62
KRH58031 Soybean plastid 17.44 15.33
KRH32612 Soybean cytosol, extracellular 5.48 15.07
KRH77066 Soybean endoplasmic reticulum, plasma membrane 15.95 14.88
KRH28412 Soybean plasma membrane 15.28 14.2
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10UniProt:A0A0R0KZS8EMBL:ACUP02000729InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_AS
EnsemblPlantsGene:GLYMA_02G045100GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0019538GO:GO:0030163InterPro:IPR021109InterPro:IPR033121EnsemblPlants:KRH69733
ProteinID:KRH69733ProteinID:KRH69733.1InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792
ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF546InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630
InterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0006ED9042SEG:seg:
Description
hypothetical protein
Coordinates
chr2:+:4161121..4167581
Molecular Weight (calculated)
66743.5 Da
IEP (calculated)
7.019
GRAVY (calculated)
-0.070
Length
602 amino acids
Sequence
(BLAST)
001: MMKFTYLNLQ QSLTPLFFNQ FSTPLSPFLN QTLFVSNTIY HSTIFFSLFL SWSLHSTIIF RQPSKFRAQQ QQQFSKTKLS HIIYLQLMAC NHGHGCVMLV
101: YLVVLSLSAS QSCYGLGTFG FDIHHRFSDP VKGMLGIDDV PQKGTPQYYA VMAHRDRIFR GRKLAGADHH APLTFTAGNV TYRIASSGFL HFANVSVGTP
201: PLWFLVALDT GSDLFWLPCD CISCVQSGLK TRTGKILKFN TYDPDKSSTS NKVSCNNNTF CRQRQQCPSA GSTCRYQIDY LSNDTSSRGF VVEDVLHLIT
301: DDVQTKDADT RIAFGCGQVQ TGVFLNGAAP NGLFGLGLDN ISVPSILAKE GLISNSFSMC FGPDGAGRIT FGDTGSPDQR KTPFNVRKLH PTYNITITQI
401: VVEDSVADLE FHAIFDSGTS FTYINDPAYT RLGEMYNSKV KANRHSSQSP DSNIPFEYCY DISINQTIEV PFLNLTMKGG DDYYVMDPIV QVFSEEEGDL
501: LCLGIQKSDS VNIIGQNFMI GYKIVFDRDN MNLGWKETNC SDDVLSNTSP INTPSPSPAV SPAIAVNPVA TSNPSINPPN RSFRIKPTFT FVVVLLPLIA
601: IF
Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.