Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G334700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 97.69 | 98.45 |
| TraesCS5A01G335500.1 | Wheat | extracellular, plasma membrane, vacuole | 95.38 | 95.38 |
| HORVU5Hr1G084490.1 | Barley | vacuole | 92.88 | 87.18 |
| EER99278 | Sorghum | extracellular, plasma membrane, vacuole | 75.38 | 74.95 |
| Zm00001d022600_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 71.73 | 73.14 |
| Os09t0542100-01 | Rice | plasma membrane | 64.81 | 68.78 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 44.04 | 51.0 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 40.96 | 48.41 |
| GSMUA_AchrUn_... | Banana | vacuole | 47.88 | 48.35 |
| TraesCS2D01G065800.1 | Wheat | vacuole | 47.31 | 48.24 |
| PGSC0003DMT400010765 | Potato | cytosol | 17.12 | 47.85 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 27.5 | 46.73 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 44.23 | 45.73 |
| CDY07819 | Canola | vacuole | 44.81 | 45.6 |
| Bra024490.1-P | Field mustard | vacuole | 44.62 | 45.4 |
| CDY29199 | Canola | vacuole | 44.62 | 45.4 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 44.62 | 45.22 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 44.42 | 45.12 |
| KRH28845 | Soybean | vacuole | 43.08 | 44.09 |
| TraesCS7D01G524300.1 | Wheat | plastid | 44.42 | 44.08 |
| KRH76603 | Soybean | vacuole | 42.88 | 43.9 |
| KRH07991 | Soybean | nucleus | 43.27 | 43.6 |
| Solyc03g033360.1.1 | Tomato | plastid | 32.5 | 43.44 |
| Solyc02g083460.2.1 | Tomato | extracellular | 43.65 | 42.12 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 42.88 | 41.37 |
| PGSC0003DMT400058018 | Potato | vacuole | 42.31 | 40.22 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 23.46 | 39.1 |
| Bra013063.1-P | Field mustard | plasma membrane | 21.73 | 38.97 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 39.42 | 38.75 |
| Bra036814.1-P | Field mustard | vacuole | 35.96 | 38.72 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 44.42 | 38.31 |
| CDX90651 | Canola | plasma membrane | 39.23 | 38.2 |
| AT3G51360.9 | Thale cress | vacuole | 36.54 | 38.15 |
| CDX73727 | Canola | vacuole | 36.15 | 38.13 |
| TraesCS6D01G282400.2 | Wheat | plasma membrane | 37.5 | 38.01 |
| CDY29013 | Canola | plasma membrane | 38.85 | 37.83 |
| KRH69733 | Soybean | nucleus | 43.46 | 37.54 |
| CDX78000 | Canola | vacuole | 36.35 | 37.5 |
| Bra012857.1-P | Field mustard | plasma membrane | 32.12 | 37.03 |
| CDX73728 | Canola | vacuole | 37.88 | 36.62 |
| CDX77999 | Canola | vacuole | 37.69 | 36.57 |
| Bra036815.1-P | Field mustard | vacuole | 37.88 | 36.35 |
| AT3G51340.1 | Thale cress | plasma membrane | 36.54 | 35.85 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 36.15 | 35.61 |
| TraesCS5D01G532900.3 | Wheat | extracellular | 13.85 | 25.09 |
| TraesCS4D01G094300.1 | Wheat | plasma membrane, vacuole | 18.85 | 24.87 |
| TraesCS2D01G273200.1 | Wheat | extracellular, plasma membrane, vacuole | 23.08 | 24.59 |
| TraesCS4D01G094200.1 | Wheat | plasma membrane, vacuole | 19.42 | 24.51 |
| TraesCS7D01G390900.1 | Wheat | vacuole | 23.08 | 24.49 |
| TraesCS4D01G365000.1 | Wheat | plasma membrane, vacuole | 18.46 | 23.41 |
| TraesCS4D01G364900.1 | Wheat | unclear | 18.27 | 23.17 |
| TraesCS4D01G100300.1 | Wheat | extracellular, plasma membrane | 18.46 | 23.13 |
| TraesCS4D01G100200.1 | Wheat | extracellular, golgi | 16.73 | 23.08 |
| TraesCS3D01G311700.2 | Wheat | plasma membrane | 21.54 | 22.4 |
| TraesCS5D01G128800.1 | Wheat | plasma membrane, vacuole | 19.42 | 22.39 |
| TraesCS4D01G072000.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 18.27 | 22.25 |
| TraesCS6D01G089100.1 | Wheat | cytosol, peroxisome, vacuole | 12.31 | 21.69 |
| TraesCS5D01G533000.1 | Wheat | plastid | 18.65 | 21.23 |
| TraesCS6D01G272600.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 19.04 | 17.84 |
| TraesCS7D01G211000.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 17.12 | 17.62 |
| TraesCS2D01G192000.1 | Wheat | plasma membrane, plastid, vacuole | 19.23 | 15.82 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PRINTS:PR00792 |
| ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF407 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 |
| SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | EnsemblPlantsGene:TraesCS5D01G340300 | EnsemblPlants:TraesCS5D01G340300.1 | SEG:seg |
Description
No Description!
Coordinates
chr5D:-:428713759..428717236
Molecular Weight (calculated)
54644.8 Da
IEP (calculated)
7.433
GRAVY (calculated)
0.035
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAVRALLL LALVAAGAEA LSLDVHHRYS ATVRGWAGLR TGPAPGTAEY YAALAGHDDL RRRSLSLAAA VAPAPGPGGP FAFADGNDTY RLNAFGFLHY
101: AVVALGTPNV TFLVALDTGS DLFWVPCDCL KCAPLSSPEY GNLKFDVYSP RKSSTSRKVP CSSSLCDLQT QCNSAASKSC PYSIEYLSDN TSSKGVLIED
201: VLYLASESGK SKITQAPITF GCGQVQTGSF LGSAAPNGLL GLGMDSKSVP SLLASQGVAA NSFSMCFGED GHGRINFGDT GSADQLETPL NIYKHNPYYN
301: ISIIGAMAGG KTFSTKFSAV VDSGTSFTAL SDPMYTEITS AFDKQVKEKR NQADSSLPFE YCYTISAKGA LSHPNISLTA KGGSIFPVND PIITITDISS
401: SPVGYCLAIM KSEGVNLIGE NFMSGLKVVF DRERLVLGWK SFNCYSVDHS SKLPVSPNPS AVPPKPASGP GSSNPEAAKR PSPNITQIDV AKPSSGSSVH
501: FHFSRTFFAA IAPLLLLAIL
101: AVVALGTPNV TFLVALDTGS DLFWVPCDCL KCAPLSSPEY GNLKFDVYSP RKSSTSRKVP CSSSLCDLQT QCNSAASKSC PYSIEYLSDN TSSKGVLIED
201: VLYLASESGK SKITQAPITF GCGQVQTGSF LGSAAPNGLL GLGMDSKSVP SLLASQGVAA NSFSMCFGED GHGRINFGDT GSADQLETPL NIYKHNPYYN
301: ISIIGAMAGG KTFSTKFSAV VDSGTSFTAL SDPMYTEITS AFDKQVKEKR NQADSSLPFE YCYTISAKGA LSHPNISLTA KGGSIFPVND PIITITDISS
401: SPVGYCLAIM KSEGVNLIGE NFMSGLKVVF DRERLVLGWK SFNCYSVDHS SKLPVSPNPS AVPPKPASGP GSSNPEAAKR PSPNITQIDV AKPSSGSSVH
501: FHFSRTFFAA IAPLLLLAIL
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.