Factsheet for TraesCS6D01G282400.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G302800.2	Wheat	plasma membrane	97.86	97.67
TraesCS6B01G332100.2	Wheat	plasma membrane	97.86	97.48
HORVU6Hr1G075110.2	Barley	plastid	93.37	86.15
KXG30744	Sorghum	extracellular, vacuole	78.75	77.84
Zm00001d018074_P001	Maize	vacuole	77.39	76.49
Os02t0751100-01	Rice	plasma membrane	77.19	76.15
Zm00001d052237_P001	Maize	plastid	73.88	58.49
GSMUA_Achr5P22890_001	Banana	endoplasmic reticulum, plasma membrane	57.7	57.03
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	58.28	56.31
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	52.05	50.38
KRG97610	Soybean	golgi, plasma membrane, vacuole	50.68	50.0
KRH31262	Soybean	extracellular, vacuole	49.9	49.14
VIT_18s0001g04790.t01	Wine grape	plasma membrane, plastid, vacuole	49.71	48.94
PGSC0003DMT400022458	Potato	endoplasmic reticulum, extracellular, vacuole	50.1	47.86
Solyc04g054490.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	49.71	47.49
CDY21633	Canola	cytosol	37.23	46.81
CDY21629	Canola	plastid, vacuole	46.78	46.33
Bra009059.1-P	Field mustard	plasma membrane, vacuole	46.39	46.03
CDX69862	Canola	plasma membrane, vacuole	46.2	45.84
PGSC0003DMT400056847	Potato	vacuole	36.26	45.59
AT5G10080.1	Thale cress	vacuole	46.78	45.45
KRH18849	Soybean	plasma membrane, vacuole	46.78	45.37
KRH16653	Soybean	plasma membrane	45.61	44.32
Solyc04g072690.2.1	Tomato	plasma membrane	43.47	42.23
TraesCS5D01G340300.1	Wheat	extracellular, plasma membrane, vacuole	38.01	37.5
TraesCS7D01G524300.1	Wheat	plastid	37.04	36.26
TraesCS2D01G065800.1	Wheat	vacuole	34.5	34.71
TraesCS5D01G532900.3	Wheat	extracellular	14.43	25.78
TraesCS2D01G273200.1	Wheat	extracellular, plasma membrane, vacuole	23.0	24.18
TraesCS4D01G094200.1	Wheat	plasma membrane, vacuole	19.1	23.79
TraesCS7D01G390900.1	Wheat	vacuole	22.61	23.67
TraesCS3D01G311700.2	Wheat	plasma membrane	22.81	23.4
TraesCS4D01G072000.1	Wheat	cytosol, mitochondrion, plastid, vacuole	17.93	21.55
TraesCS5D01G533000.1	Wheat	plastid	18.71	21.01
TraesCS5D01G128800.1	Wheat	plasma membrane, vacuole	18.32	20.84
TraesCS4D01G100300.1	Wheat	extracellular, plasma membrane	16.18	20.0
TraesCS4D01G094300.1	Wheat	plasma membrane, vacuole	15.2	19.8
TraesCS4D01G365000.1	Wheat	plasma membrane, vacuole	15.79	19.76
TraesCS4D01G364900.1	Wheat	unclear	15.79	19.76
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	19.88	18.38
TraesCS4D01G100200.1	Wheat	extracellular, golgi	13.45	18.3
TraesCS6D01G089100.1	Wheat	cytosol, peroxisome, vacuole	10.14	17.63
TraesCS7D01G211000.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	16.76	17.03
TraesCS2D01G192000.1	Wheat	plasma membrane, plastid, vacuole	18.32	14.87

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538	GO:GO:0046658	InterPro:IPR021109
InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF303	InterPro:Pepsin-like_dom	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	EnsemblPlantsGene:TraesCS6D01G282400	EnsemblPlants:TraesCS6D01G282400.2	TIGR:cd05471
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:389699877..389704100

Molecular Weight (calculated)

55370.5 Da

IEP (calculated)

6.383

GRAVY (calculated)

-0.113

Length

513 amino acids

Sequence
(BLAST)

001: MRLPLLLLTL LAAAAWAPAA AATLSTRMVH RLSDEARAAA GPHAARWPPH GSGGYYRALV RSDLQRQKRK HQLLSVSEAG GIFSPGNDFG WLYYTWVDVG
101: TPNTSFMVAL DTGSDLFWVP CDCIECAPLA GYRETLDRDL GIYKPAESTT SRHLPCSHEL CSSGSGCSSP KQPCPYSTDY LQENTTSSGL LIEDVLHLNS
201: RESHAPVKAS VIIGCGRKQS GSYLDGIAPD GLLGLGMADI SVPSFLARAG LVRNSFSMCF KEYSGRIFFG DQGVSTQQST PFVPLYGKFQ TYAVNVDKSC
301: VGHKCFEGTN FEAIVDSGTS FTALPLNVYK AVTVEFDRQV NASRITQEDD SFEYCYSASP LEMPDVPTVT LNFAANKSFQ VVNPTIVRKD GEGSIAGFCL
401: AVQKSPEAIG IIGQNFLTGY HIVFDKENMK LGWYRSECHD LDNSTTVPLG PSQHHSPGDP LPSSEQQTSP TVTPPAVAGK APTSSGGPSN LHRLLANCCS
501: LLFLTISTVF FIS

Best Arabidopsis Sequence Match ( AT5G10080.1 )
(BLAST)

001: MVSRSAFLLF CVLFLATEET LASLFSSRLI HRFSDEGRAS IKTPSSSDSL PNKQSLEYYR LLAESDFRRQ RMNLGAKVQS LVPSEGSKTI SSGNDFGWLH
101: YTWIDIGTPS VSFLVALDTG SNLLWIPCNC VQCAPLTSTY YSSLATKDLN EYNPSSSSTS KVFLCSHKLC DSASDCESPK EQCPYTVNYL SGNTSSSGLL
201: VEDILHLTYN TNNRLMNGSS SVKARVVIGC GKKQSGDYLD GVAPDGLMGL GPAEISVPSF LSKAGLMRNS FSLCFDEEDS GRIYFGDMGP SIQQSTPFLQ
301: LDNNKYSGYI VGVEACCIGN SCLKQTSFTT FIDSGQSFTY LPEEIYRKVA LEIDRHINAT SKNFEGVSWE YCYESSAEPK VPAIKLKFSH NNTFVIHKPL
401: FVFQQSQGLV QFCLPISPSG QEGIGSIGQN YMRGYRMVFD RENMKLGWSP SKCQEDKIEP PQASPGSTSS PNPLPTDEQQ SRGGHAVSPA IAGKTPSKTP
501: SSSSSYSFSS IMRLFNSLLL LHWLASLM

Arabidopsis Description

Aspartic proteinase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX20]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.