Factsheet for Solyc04g072690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056847	Potato	vacuole	74.43	96.32
VIT_18s0001g04790.t01	Wine grape	plasma membrane, plastid, vacuole	54.73	55.47
Solyc04g054490.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	52.46	51.58
KRH18849	Soybean	plasma membrane, vacuole	50.95	50.85
KRH16653	Soybean	plasma membrane	49.81	49.81
GSMUA_Achr5P22890_001	Banana	endoplasmic reticulum, plasma membrane	46.97	47.78
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	46.97	46.7
Zm00001d018074_P001	Maize	vacuole	44.89	45.66
Os02t0751100-01	Rice	plasma membrane	43.56	44.23
KXG30744	Sorghum	extracellular, vacuole	43.37	44.12
TraesCS6A01G302800.2	Wheat	plasma membrane	42.61	43.77
TraesCS6D01G282400.2	Wheat	plasma membrane	42.23	43.47
TraesCS6B01G332100.2	Wheat	plasma membrane	42.23	43.3
HORVU6Hr1G075110.2	Barley	plastid	43.18	41.01
Zm00001d052237_P001	Maize	plastid	42.8	34.88
Solyc02g083450.2.1	Tomato	vacuole	32.95	33.4
Solyc03g033360.1.1	Tomato	plastid	24.43	33.16
Solyc02g083460.2.1	Tomato	extracellular	30.3	29.68
Solyc01g011220.1.1	Tomato	cytosol	10.23	24.55
Solyc06g018100.2.1	Tomato	extracellular, plasma membrane	18.94	23.42
Solyc06g009110.2.1	Tomato	extracellular	18.37	23.1
Solyc06g009090.1.1	Tomato	extracellular, vacuole	9.09	22.64
Solyc04g056590.2.1	Tomato	golgi, plasma membrane, vacuole	20.45	22.36
Solyc09g008600.2.1	Tomato	extracellular, plasma membrane, vacuole	21.02	22.2
Solyc01g011300.1.1	Tomato	cytosol	4.92	22.03
Solyc05g055800.2.1	Tomato	extracellular, vacuole	19.89	22.01
Solyc03g058400.2.1	Tomato	vacuole	19.89	21.97
Solyc05g053900.2.1	Tomato	golgi, vacuole	19.51	21.55
Solyc09g098340.2.1	Tomato	extracellular	19.32	21.12
Solyc11g066620.1.1	Tomato	extracellular	19.7	20.84
Solyc01g011330.1.1	Tomato	plastid	7.01	20.67
Solyc06g060130.2.1	Tomato	extracellular	17.23	20.63
Solyc06g009080.1.1	Tomato	cytosol	4.17	20.0
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	18.18	17.08
Solyc01g098710.2.1	Tomato	plasma membrane, vacuole	20.08	16.28
Solyc08g029230.2.1	Tomato	plasma membrane	19.51	15.65
Solyc10g085760.1.1	Tomato	cytosol, mitochondrion, plastid	7.77	15.41
Solyc10g044740.1.1	Tomato	plastid	18.56	15.36

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A55	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121
UniProt:K4BTQ6	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF303	InterPro:Pepsin-like_dom	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g072690.2	EnsemblPlants:Solyc04g072690.2.1	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix
UniParc:UPI0002766FC8	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:+:59648096..59654514

Molecular Weight (calculated)

57725.9 Da

IEP (calculated)

6.498

GRAVY (calculated)

-0.056

Length

528 amino acids

Sequence
(BLAST)

001: MAISLTAVVL LMTAVLMLSV ELAAGYTFSS RLIHGFSDEA LSFWASKGKS MTWPKRESVE HMRLLLSNDW KRQRLKLGSQ KQLLFPSEGS ETHFYGNELS
101: WLHYVWIDIG TPNTSFLVAL DAGSDLLWLP CNCVQCAPLS SSYYSMLDKD LNEYSPARSS SSKYLSCSHQ LCELGPNCRS PKEHCPYTVN YYSENTSTSG
201: FLFEDQLHLT SVGGHEHQGS VLAPIVIGCG SKQSGNYLSG AAPDGVMGLG PGEISVPSLL AKSGFVPRSF SLCFGKSNSG TIFFGDKGPE NQRRSSFVSL
301: DENYNTYVVE VQHYCVGGTC PKQSGFQALV DSGSSFTFLP SEIFTKVVTE FEEQMNVTRL AIEDFPCCYK ASSQGLPNIP SMKLLLAANQ SFVIQNPMFT
401: ISSSQGDNFY CVGLLPIEGM IGIIGQNFME GYRLVFDWEN MKLGWSRSKC QDIDGTAKVS PTPPPSGLTS NPLPTTEQQR NPGGHAVAPA IAGKATPKPS
501: AASLLAISRH YTMSSLIFLL VVWLPYLI

Best Arabidopsis Sequence Match ( AT5G10080.1 )
(BLAST)

001: MVSRSAFLLF CVLFLATEET LASLFSSRLI HRFSDEGRAS IKTPSSSDSL PNKQSLEYYR LLAESDFRRQ RMNLGAKVQS LVPSEGSKTI SSGNDFGWLH
101: YTWIDIGTPS VSFLVALDTG SNLLWIPCNC VQCAPLTSTY YSSLATKDLN EYNPSSSSTS KVFLCSHKLC DSASDCESPK EQCPYTVNYL SGNTSSSGLL
201: VEDILHLTYN TNNRLMNGSS SVKARVVIGC GKKQSGDYLD GVAPDGLMGL GPAEISVPSF LSKAGLMRNS FSLCFDEEDS GRIYFGDMGP SIQQSTPFLQ
301: LDNNKYSGYI VGVEACCIGN SCLKQTSFTT FIDSGQSFTY LPEEIYRKVA LEIDRHINAT SKNFEGVSWE YCYESSAEPK VPAIKLKFSH NNTFVIHKPL
401: FVFQQSQGLV QFCLPISPSG QEGIGSIGQN YMRGYRMVFD RENMKLGWSP SKCQEDKIEP PQASPGSTSS PNPLPTDEQQ SRGGHAVSPA IAGKTPSKTP
501: SSSSSYSFSS IMRLFNSLLL LHWLASLM

Arabidopsis Description

Aspartic proteinase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX20]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.