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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
extracellular: 22364583
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400030753 Potato extracellular 93.88 93.88
Solyc06g009080.1.1 Tomato cytosol 18.37 73.64
Solyc06g009110.2.1 Tomato extracellular 67.8 71.19
VIT_18s0001g02420.t01 Wine grape vacuole 52.83 55.88
KRH64665 Soybean vacuole 47.62 54.83
KRH64664 Soybean vacuole 51.93 54.39
KRH53249 Soybean vacuole 51.47 53.92
KRH16379 Soybean plasma membrane, vacuole 54.65 53.32
KRH17969 Soybean vacuole 41.95 52.86
AT1G44130.1 Thale cress vacuole 47.62 51.85
Solyc06g018100.2.1 Tomato extracellular, plasma membrane 49.21 50.82
CDY14973 Canola vacuole 46.71 50.24
GSMUA_Achr3P19030_001 Banana vacuole 47.17 49.76
Bra036941.1-P Field mustard vacuole 45.8 49.15
CDY12535 Canola vacuole 43.31 48.6
CDY41786 Canola plasma membrane, vacuole 49.66 48.45
Os12t0177500-01 Rice plasma membrane, vacuole 45.8 47.98
CDY10133 Canola vacuole 46.26 47.78
Bra015669.1-P Field mustard plasma membrane, vacuole 49.43 47.7
CDX88370 Canola plasma membrane, vacuole 49.66 47.61
CDX87518 Canola plasma membrane, vacuole 49.66 47.51
Zm00001d004734_P001 Maize mitochondrion 43.99 46.75
GSMUA_Achr6P17740_001 Banana extracellular 47.85 46.68
EES09417 Sorghum plasma membrane, vacuole 43.54 46.27
TraesCS5A01G113400.1 Wheat plasma membrane, vacuole 46.94 46.0
TraesCS5B01G119900.1 Wheat plasma membrane, vacuole 46.94 45.9
HORVU4Hr1G017390.1 Barley vacuole 42.86 45.87
Solyc06g009090.1.1 Tomato extracellular, vacuole 22.0 45.75
HORVU5Hr1G037120.7 Barley plasma membrane, vacuole 46.71 45.68
TraesCS4D01G094200.1 Wheat plasma membrane, vacuole 42.63 45.63
GSMUA_Achr10P... Banana extracellular, plasma membrane, vacuole 44.67 45.5
Os11t0183900-01 Rice plasma membrane 43.08 45.45
TraesCS5D01G128800.1 Wheat plasma membrane, vacuole 46.49 45.45
TraesCS4A01G219500.1 Wheat plasma membrane, vacuole 42.18 45.15
TraesCS4B01G098000.1 Wheat plasma membrane, vacuole 41.95 44.9
CDY18730 Canola extracellular, plasma membrane, vacuole 40.59 44.64
AT1G77480.1 Thale cress golgi, plastid, vacuole 47.17 44.64
TraesCSU01G146200.1 Wheat vacuole 39.23 44.36
KXG23105 Sorghum plasma membrane, vacuole 46.03 44.32
TraesCS7B01G475600.1 Wheat vacuole 42.18 44.29
Zm00001d023579_P002 Maize plasma membrane, vacuole 46.26 43.31
Os11t0184600-00 Rice extracellular 22.22 41.7
EES08111 Sorghum vacuole 38.55 41.67
EES09418 Sorghum endoplasmic reticulum, golgi, vacuole 37.41 40.44
Os11t0184800-01 Rice vacuole 37.19 40.0
TraesCS4D01G100300.1 Wheat extracellular, plasma membrane 37.19 39.52
TraesCS4B01G103200.1 Wheat golgi, plasma membrane 36.28 39.51
TraesCS7A01G037900.1 Wheat extracellular 23.81 39.33
HORVU7Hr1G006700.1 Barley extracellular 35.37 39.29
TraesCS4D01G365000.1 Wheat plasma membrane, vacuole 35.83 38.54
TraesCS4B01G103400.1 Wheat golgi, plasma membrane 36.96 38.35
TraesCSU01G168200.1 Wheat extracellular, plasma membrane, vacuole 31.29 38.23
TraesCS4A01G219600.1 Wheat extracellular 20.18 38.2
TraesCS4D01G100200.1 Wheat extracellular, golgi 32.2 37.67
TraesCS4D01G094300.1 Wheat plasma membrane, vacuole 33.56 37.56
TraesCS5A01G541900.1 Wheat golgi, vacuole 36.05 37.32
TraesCS5B01G038800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 34.69 37.32
TraesCS5A01G541800.1 Wheat golgi 34.69 37.32
TraesCS4D01G364900.1 Wheat unclear 34.69 37.32
TraesCS4A01G450900.1 Wheat extracellular 32.43 37.05
TraesCS4B01G098100.1 Wheat plasma membrane, vacuole 32.88 36.71
TraesCS4B01G372300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.75 36.36
TraesCS6B01G122100.1 Wheat plasma membrane 33.56 36.1
HORVU4Hr1G088530.1 Barley golgi, mitochondrion, vacuole 34.69 35.66
TraesCS5A01G542000.1 Wheat mitochondrion 36.73 35.37
TraesCS6D01G089100.1 Wheat cytosol, peroxisome, vacuole 21.54 32.2
Solyc06g069190.2.1 Tomato cytosol, nucleus, vacuole 35.6 27.94
Solyc01g011220.1.1 Tomato cytosol 12.7 25.45
Solyc01g011300.1.1 Tomato cytosol 6.58 24.58
Solyc10g085760.1.1 Tomato cytosol, mitochondrion, plastid 14.29 23.68
Solyc09g008600.2.1 Tomato extracellular, plasma membrane, vacuole 25.17 22.2
Solyc03g058400.2.1 Tomato vacuole 24.04 22.18
Solyc05g053900.2.1 Tomato golgi, vacuole 23.81 21.97
Solyc01g011330.1.1 Tomato plastid 8.84 21.79
Solyc04g056590.2.1 Tomato golgi, plasma membrane, vacuole 23.58 21.53
Solyc09g098340.2.1 Tomato extracellular 22.68 20.7
Solyc05g055800.2.1 Tomato extracellular, vacuole 22.0 20.34
Solyc11g066620.1.1 Tomato extracellular 22.9 20.24
Solyc03g033360.1.1 Tomato plastid 17.01 19.28
Solyc10g044740.1.1 Tomato plastid 25.62 17.71
Solyc02g083450.2.1 Tomato vacuole 20.86 17.66
Solyc02g083460.2.1 Tomato extracellular 21.54 17.63
Solyc04g054490.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 21.32 17.5
Solyc04g072690.2.1 Tomato plasma membrane 20.63 17.23
Solyc01g098710.2.1 Tomato plasma membrane, vacuole 25.4 17.2
Solyc08g029230.2.1 Tomato plasma membrane 25.62 17.17
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10MEROPS:A01.073InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056
GO:GO:0016787GO:GO:0019538GO:GO:0030163InterPro:IPR021109InterPro:IPR033121UniProt:K4C6J4
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF316
InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTMEnsemblPlantsGene:Solyc06g060130.2EnsemblPlants:Solyc06g060130.2.1InterPro:TAXi_C
InterPro:TAXi_NUniParc:UPI0002765F6ASEG:seg:::
Description
No Description!
Coordinates
chr6:+:38075064..38079856
Molecular Weight (calculated)
48621.0 Da
IEP (calculated)
6.855
GRAVY (calculated)
-0.117
Length
441 amino acids
Sequence
(BLAST)
001: MKVILLVLHF LLLLESCFSA FNFPIWKKQL KSGSSLVFPL AGNVYPVGYY QVTLEVGRPP KPYFFDIDTG SDLTWLQCDA PCAKCSPAPH NLYKPHRNVV
101: TCKDPVCTSL HWPESHPCHD PNEQCDYEVA YADSGSSLGV LVKDTFVLRF TNGSTAAPHL IFGCGYSQEV PVSTHSPFTD GVLGLAYGKS SIVSQLSGLG
201: YIRNVVGHCL SAQGGGFLFF GDDVLPSSEI AWRPIEQTSS EKHYSLGPAE LLFDGQATGI KSLPIIFDSG STFTYFSSKA YDIFLSSIKK NINAKQLTDA
301: TDDKSLPVCW SGSKPFKSVN DATIYFKPFT LSFMKAKNVK FQLLPEAYLI VTEHGNVCLG ILNGTEVGLE NHNLIGDISL LDKMVIYDNE KKQIGWHPAN
401: CNKFPISRDH GEDYYDAYPA NIGLNKGTCP AKFDSLKQKQ K
Best Arabidopsis Sequence Match ( AT4G33490.2 )
(BLAST)
001: MEKMNVRFMI VLMVMSLVLG FSSAVDFRWR KTAGFSDRFT RAVSSVVFPV HGNVYPLGYY NVTINIGQPP RPYYLDLDTG SDLTWLQCDA PCVRCLEAPH
101: PLYQPSSDLI PCNDPLCKAL HLNSNQRCET PEQCDYEVEY ADGGSSLGVL VRDVFSMNYT QGLRLTPRLA LGCGYDQIPG ASSHHPLDGV LGLGRGKVSI
201: LSQLHSQGYV KNVIGHCLSS LGGGILFFGD DLYDSSRVSW TPMSREYSKH YSPAMGGELL FGGRTTGLKN LLTVFDSGSS YTYFNSKAYQ AVTYLLKREL
301: SGKPLKEARD DHTLPLCWQG RRPFMSIEEV KKYFKPLALS FKTGWRSKTL FEIPPEAYLI ISMKGNVCLG ILNGTEIGLQ NLNLIGDISM QDQMIIYDNE
401: KQSIGWMPVD CDELASLKAA QVYEY
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q8LCW1]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.