Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- plasma membrane 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010418 | Potato | cytosol, nucleus, vacuole | 95.2 | 95.88 |
| VIT_17s0000g03880.t01 | Wine grape | extracellular, plasma membrane, vacuole | 51.25 | 60.89 |
| KRH39216 | Soybean | nucleus, peroxisome, vacuole | 51.6 | 50.7 |
| GSMUA_Achr6P30620_001 | Banana | cytosol, nucleus, vacuole | 48.58 | 50.09 |
| KRH48461 | Soybean | nucleus, peroxisome, vacuole | 50.71 | 49.65 |
| CDY60079 | Canola | cytosol | 46.98 | 48.98 |
| AT1G49050.1 | Thale cress | cytosol, plastid, vacuole | 50.71 | 48.89 |
| Bra032272.1-P | Field mustard | cytosol | 46.8 | 48.79 |
| CDY04326 | Canola | cytosol, endoplasmic reticulum, vacuole | 47.51 | 47.42 |
| EES05585 | Sorghum | endoplasmic reticulum, peroxisome, plastid, vacuole | 45.91 | 46.32 |
| HORVU6Hr1G072910.3 | Barley | cytosol, endoplasmic reticulum, peroxisome | 45.55 | 46.29 |
| TraesCS6A01G291200.1 | Wheat | vacuole | 45.2 | 46.18 |
| TraesCS6B01G321200.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 45.37 | 45.86 |
| TraesCS6D01G272600.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 45.02 | 45.59 |
| TraesCS7A01G208600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.93 | 45.1 |
| Os02t0730700-02 | Rice | cytosol, peroxisome, vacuole | 45.73 | 44.85 |
| TraesCS7D01G211000.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 39.86 | 44.36 |
| Os06t0268700-01 | Rice | vacuole | 42.35 | 44.24 |
| HORVU7Hr1G042490.1 | Barley | endoplasmic reticulum, peroxisome, vacuole | 39.68 | 43.9 |
| TraesCS7B01G115900.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 39.32 | 43.5 |
| Zm00001d051761_P001 | Maize | endoplasmic reticulum, peroxisome, vacuole | 44.66 | 43.28 |
| Solyc06g009090.1.1 | Tomato | extracellular, vacuole | 15.66 | 41.51 |
| KXG19766 | Sorghum | cytosol, plastid, vacuole | 37.9 | 40.65 |
| Zm00001d045695_P001 | Maize | cytosol, endoplasmic reticulum, vacuole | 38.26 | 40.19 |
| Solyc06g009110.2.1 | Tomato | extracellular | 29.36 | 39.29 |
| Solyc06g009080.1.1 | Tomato | cytosol | 7.47 | 38.18 |
| Solyc06g060130.2.1 | Tomato | extracellular | 27.94 | 35.6 |
| Solyc06g018100.2.1 | Tomato | extracellular, plasma membrane | 26.87 | 35.36 |
| Solyc10g085760.1.1 | Tomato | cytosol, mitochondrion, plastid | 11.39 | 24.06 |
| Solyc01g011220.1.1 | Tomato | cytosol | 9.07 | 23.18 |
| Solyc05g053900.2.1 | Tomato | golgi, vacuole | 19.57 | 23.01 |
| Solyc01g011300.1.1 | Tomato | cytosol | 4.8 | 22.88 |
| Solyc09g008600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 19.75 | 22.2 |
| Solyc11g066620.1.1 | Tomato | extracellular | 19.57 | 22.04 |
| Solyc03g058400.2.1 | Tomato | vacuole | 18.68 | 21.97 |
| Solyc04g056590.2.1 | Tomato | golgi, plasma membrane, vacuole | 18.68 | 21.74 |
| Solyc01g011330.1.1 | Tomato | plastid | 6.76 | 21.23 |
| Solyc09g098340.2.1 | Tomato | extracellular | 18.15 | 21.12 |
| Solyc05g055800.2.1 | Tomato | extracellular, vacuole | 17.62 | 20.75 |
| Solyc03g033360.1.1 | Tomato | plastid | 13.17 | 19.02 |
| Solyc02g083460.2.1 | Tomato | extracellular | 17.44 | 18.18 |
| Solyc04g072690.2.1 | Tomato | plasma membrane | 17.08 | 18.18 |
| Solyc10g044740.1.1 | Tomato | plastid | 20.11 | 17.71 |
| Solyc04g054490.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 16.55 | 17.32 |
| Solyc02g083450.2.1 | Tomato | vacuole | 15.84 | 17.08 |
| Solyc08g029230.2.1 | Tomato | plasma membrane | 19.75 | 16.87 |
| Solyc01g098710.2.1 | Tomato | plasma membrane, vacuole | 19.22 | 16.59 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | MEROPS:A01.A25 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0050832 | InterPro:IPR021109 | InterPro:IPR033121 |
| UniProt:K4C892 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PRINTS:PR00792 | PFscan:PS51767 |
| PANTHER:PTHR13683 | PANTHER:PTHR13683:SF334 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | EnsemblPlantsGene:Solyc06g069190.2 | EnsemblPlants:Solyc06g069190.2.1 |
| InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI000276678C | SEG:seg | : |
Description
Aspartyl protease APCB1 [Source:Projected from Arabidopsis thaliana (AT1G49050) UniProtKB/Swiss-Prot;Acc:Q9M9A8]
Coordinates
chr6:-:42957830..42962777
Molecular Weight (calculated)
62862.5 Da
IEP (calculated)
5.114
GRAVY (calculated)
-0.315
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETKNSPPI QGVVIITLPP PDNPSYGKTI TAFTLSDSPT HQQQQEQEQE EEPPQQSQPH NQDVNAGVLH VSLERSFFFR PTIVFGLLGI SLIALSFWSS
101: LTQETLFELR DVEQDHKSSN SSFILPLYPK RGGAWNSRTD VEFKLGRFVD FKPDNFMDQE KIAKSLSAAT KLDSSANFPV RGNIHSEGLY YTYMLVGNPP
201: KPYFLDIDTG SDLMWIQCDA PCTSCAKGAH PLYKPRNVNM IPPKNPYCVE VQENLRSKYC DNCHQCDYEI EYADRSSSVG VLAKDELQLV LANGTGTKPN
301: VVFGCAYDQQ GTLLNTLAST DGILGLSRAP ISLPSQLASH GLINNVIGHC LRTDTNGGYL FLGNDFVPQW RMSWVPMLNN PFPNLYQAQL MKMNYGGKDL
401: QLGSRGYGQD SVVFDSGSTY TYFTDQAYKA LISMLEEISS EDLIKDASDT TLPICWRAKF PVRSIEEVRQ FFKPLNLQFG SKWRVVSTKL WIPAEGYLTI
501: SEKSNVCLGI LDGSNVHDGS AIILGDISLR GQLFVYDNVN QKIGWIRSNC ERPENVPSLP FF
101: LTQETLFELR DVEQDHKSSN SSFILPLYPK RGGAWNSRTD VEFKLGRFVD FKPDNFMDQE KIAKSLSAAT KLDSSANFPV RGNIHSEGLY YTYMLVGNPP
201: KPYFLDIDTG SDLMWIQCDA PCTSCAKGAH PLYKPRNVNM IPPKNPYCVE VQENLRSKYC DNCHQCDYEI EYADRSSSVG VLAKDELQLV LANGTGTKPN
301: VVFGCAYDQQ GTLLNTLAST DGILGLSRAP ISLPSQLASH GLINNVIGHC LRTDTNGGYL FLGNDFVPQW RMSWVPMLNN PFPNLYQAQL MKMNYGGKDL
401: QLGSRGYGQD SVVFDSGSTY TYFTDQAYKA LISMLEEISS EDLIKDASDT TLPICWRAKF PVRSIEEVRQ FFKPLNLQFG SKWRVVSTKL WIPAEGYLTI
501: SEKSNVCLGI LDGSNVHDGS AIILGDISLR GQLFVYDNVN QKIGWIRSNC ERPENVPSLP FF
001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG
Arabidopsis Description
APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]
SUBAcon: [plastid,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.