Factsheet for Bra032272.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60079	Canola	cytosol	99.81	99.81
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	78.29	72.38
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	49.91	56.87
KRH39216	Soybean	nucleus, peroxisome, vacuole	51.02	48.08
KRH48461	Soybean	nucleus, peroxisome, vacuole	50.83	47.74
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	48.05	47.52
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	48.98	47.31
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	48.79	46.8
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	45.27	43.81
TraesCS6A01G291200.1	Wheat	vacuole	44.16	43.27
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	44.34	43.22
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	43.97	42.63
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	43.6	42.34
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	44.53	41.38
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	43.97	41.36
TraesCS7B01G115900.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	38.96	41.34
TraesCS7D01G211000.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	38.03	40.59
TraesCS7A01G208600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	38.03	40.2
HORVU7Hr1G042490.1	Barley	endoplasmic reticulum, peroxisome, vacuole	37.85	40.16
Os06t0268700-01	Rice	vacuole	38.96	39.03
KXG19766	Sorghum	cytosol, plastid, vacuole	37.66	38.74
Zm00001d045695_P001	Maize	cytosol, endoplasmic reticulum, vacuole	38.03	38.32
Bra011446.1-P	Field mustard	mitochondrion, plasma membrane, plastid	28.76	36.99
Bra036941.1-P	Field mustard	vacuole	27.09	35.52
Bra015669.1-P	Field mustard	plasma membrane, vacuole	29.13	34.35
Bra040597.1-P	Field mustard	vacuole	22.63	24.95
Bra035522.1-P	Field mustard	vacuole	18.74	23.54
Bra005254.1-P	Field mustard	vacuole	21.89	23.41
Bra040466.1-P	Field mustard	plasma membrane	20.04	22.88
Bra035359.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	20.41	22.77
Bra032452.1-P	Field mustard	extracellular, plasma membrane	20.22	22.57
Bra021415.1-P	Field mustard	vacuole	16.51	22.36
Bra002434.1-P	Field mustard	vacuole	19.85	21.79
Bra020219.1-P	Field mustard	extracellular	19.67	21.63
Bra031617.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	19.48	21.21
Bra039497.1-P	Field mustard	extracellular, vacuole	18.92	20.77
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	18.37	19.68
Bra036814.1-P	Field mustard	vacuole	17.44	19.46
Bra030717.1-P	Field mustard	vacuole	16.88	19.4
Bra024490.1-P	Field mustard	vacuole	18.37	19.37
Bra011646.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	18.18	18.49
Bra036815.1-P	Field mustard	vacuole	18.18	18.08
Bra009059.1-P	Field mustard	plasma membrane, vacuole	16.88	17.6
Bra036047.1-P	Field mustard	plastid	20.22	17.44
Bra012857.1-P	Field mustard	plasma membrane	14.29	17.07
Bra029989.1-P	Field mustard	plasma membrane	19.67	16.85
Bra033660.1-P	Field mustard	plasma membrane	19.48	16.13
Bra013063.1-P	Field mustard	plasma membrane	8.53	15.86

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	EnsemblPlantsGene:Bra032272	EnsemblPlants:Bra032272.1
EnsemblPlants:Bra032272.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009605	GO:GO:0009607
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0050832	InterPro:IPR021109
InterPro:IPR033121	UniProt:M4ETZ0	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0002547C9C	SEG:seg	:	:

Description

AT1G49050 (E=5e-192) | aspartyl protease family protein

Coordinates

chrA05:-:12115725..12118148

Molecular Weight (calculated)

59749.3 Da

IEP (calculated)

5.707

GRAVY (calculated)

-0.104

Length

539 amino acids

Sequence
(BLAST)

001: MEPQPDDQRA HAVVIITLPP SDDPSQGKTI SAFTLTDHPN PTFQPGPPDP GFWLSDLSTG SPRLVLSLIA ISLLAVAFYA SVFPNTVQMF RVYDDERDRD
101: DEPNRRETSS FVFPVYHKLG ARAIPDRKLA EVVDVLKTGI LVKVNDASFD SSTTILPVAG DVYPNGFYFT RILVGKHYFY LDIDTGSDLT WVQCDAPCRS
201: CAKGANQLYT PRKGMLVRSA ESLCVEVQKN QMTQHCEDCE QCDYEIDYAD LSSSLGVLTK DEFHINLHNG SVADLDIVFG CGYDQQGLLL NTLVKTDGIL
301: GLSRAQISLP SQLATRGIIS NVIGHCLPSD LNGEGYIIMG SDLVPSHGIS WVPMLHHSHL EVYQMQVSKV SYGNSMLSSD GRVGKVLFDT GSSYTYFPNK
401: AYSHLVKSLK EVSGLGLTLD ESDKTLPICW RADFVISSLS DVKRFFRPIT LQIGSKWWII SRKLVLQPED YLIISNKGNV CLGILDGSSV HDGSTIILGD
501: VSMRGHLIVY DNVKRRIGWM RSDCVRPRDS DFNVPFFQG

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.