Factsheet for TraesCS6A01G291200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
vacuole 3
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	extracellular, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	98.36	97.3
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	97.82	96.94
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	95.45	94.94
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	81.27	80.25
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	82.36	79.06
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	79.27	75.17
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	57.82	58.35
TraesCS7A01G208600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.91	57.06
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	43.82	50.95
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	46.18	45.52
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	46.18	45.2
Bra032272.1-P	Field mustard	cytosol	43.27	44.16
CDY60079	Canola	cytosol	43.27	44.16
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	44.0	42.98
KRH39216	Soybean	nucleus, peroxisome, vacuole	44.18	42.48
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	44.91	42.37
KRH48461	Soybean	nucleus, peroxisome, vacuole	44.0	42.16
TraesCS4A01G219500.1	Wheat	plasma membrane, vacuole	28.18	37.62
TraesCS5A01G113400.1	Wheat	plasma membrane, vacuole	30.18	36.89
TraesCS4A01G450900.1	Wheat	extracellular	24.18	34.46
TraesCS4A01G219600.1	Wheat	extracellular	14.18	33.48
TraesCS7A01G037900.1	Wheat	extracellular	15.09	31.09
TraesCS5A01G541900.1	Wheat	golgi, vacuole	23.82	30.75
TraesCS5A01G541800.1	Wheat	golgi	22.91	30.73
TraesCS5A01G542000.1	Wheat	mitochondrion	24.18	29.04
TraesCS2A01G275000.1	Wheat	extracellular, plasma membrane, vacuole	20.36	22.95
TraesCS7A01G480600.1	Wheat	extracellular, plasma membrane, vacuole	19.27	22.51
TraesCS7A01G395300.1	Wheat	vacuole	20.0	22.45
TraesCS3A01G319800.1	Wheat	plasma membrane	19.64	21.51
TraesCS6A01G302800.2	Wheat	plasma membrane	18.55	19.84
TraesCS2A01G067500.1	Wheat	vacuole	18.36	19.69
TraesCS5A01G335500.1	Wheat	extracellular, plasma membrane, vacuole	18.18	19.23
TraesCS7A01G537200.1	Wheat	plasma membrane	18.18	18.69
TraesCS4A01G241700.1	Wheat	plastid	16.91	18.02
TraesCS2A01G195800.1	Wheat	plasma membrane	18.18	15.82

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	InterPro:Nucellin	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G291200	EnsemblPlants:TraesCS6A01G291200.1
TIGR:cd05475	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:522614980..522618638

Molecular Weight (calculated)

60310.8 Da

IEP (calculated)

7.212

GRAVY (calculated)

-0.351

Length

550 amino acids

Sequence
(BLAST)

001: MPMPPPPPPP PQLHGVVIIT LPPPDQPSKG KTITAFTYTD EPGAGAPAPP LNRGPPMATA GREARRSRRA VSRRAGAMVL VLGALALAAY YSFYSDVAVQ
101: FLGMEEEEAQ KERNETKSFL FQLYPKAHQG RALREFGNIK LAAKRVDDGG GRKVTKKLDV KGATSAGTNS TVLLPIKGNV FPDGQYYTSI FVGNPPRPYF
201: LDVDTGSDLT WIQCDAPCTN CAQGPHPLYK PAKEKIVPPR DLLCQELQGD QNNCETCKQC DYEIEYADRS SSMGVLAKDD MHLIATNGGR EKLDFVFGCA
301: YDQQGQLLSS PAKTDGILGL SSAAISLPSQ LASKGIISNI FGHCITRETN GGGYMFLGDD YVPRWGMTWA PIRGGPDNLY HTKAQKVNYG DQELSMHGHA
401: GNSVQVIFDS GSSYTYLPEE MYKNLIDAIK DDSPSFVQDS SDTTLPLCWK ADFSVRSFFK PLNLHFGRRW FVVPKTFTIV PDDYLIISEK GNVCLGLLNG
501: TEINHGSTII VGDVSLRGKL VVYDNERRQI GWANSECTKP QSQKGFPFFL

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.