Factsheet for Zm00001d051761_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, peroxisome

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, vacuole
Any Predictor:	mitochondrion, peroxisome, plastid, vacuole
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	88.79	92.46
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	76.03	79.75
TraesCS6A01G291200.1	Wheat	vacuole	75.17	79.27
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	75.69	78.96
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	75.0	78.38
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	77.41	78.36
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	54.14	57.61
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	43.97	53.91
Zm00001d045695_P001	Maize	cytosol, endoplasmic reticulum, vacuole	45.0	48.78
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	43.28	44.98
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	43.28	44.66
Bra032272.1-P	Field mustard	cytosol	41.38	44.53
CDY60079	Canola	cytosol	41.38	44.53
KRH39216	Soybean	nucleus, peroxisome, vacuole	43.1	43.71
KRH48461	Soybean	nucleus, peroxisome, vacuole	43.1	43.55
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	42.07	43.34
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	42.93	42.71
Zm00001d004734_P001	Maize	mitochondrion	27.41	38.31
Zm00001d023579_P002	Maize	plasma membrane, vacuole	29.14	35.88
Zm00001d016476_P001	Maize	vacuole	19.66	22.71
Zm00001d012633_P001	Maize	extracellular, plasma membrane, vacuole	19.83	22.59
Zm00001d050521_P001	Maize	vacuole	19.48	22.47
Zm00001d016477_P004	Maize	vacuole	19.83	22.2
Zm00001d052720_P002	Maize	plasma membrane	18.62	21.26
Zm00001d044304_P002	Maize	plasma membrane, vacuole	18.79	20.3
Zm00001d018074_P001	Maize	vacuole	17.59	19.65
Zm00001d022600_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	16.9	19.22
Zm00001d004132_P001	Maize	extracellular	16.55	18.53
Zm00001d014804_P001	Maize	extracellular	16.9	18.05
Zm00001d036037_P001	Maize	vacuole	16.38	16.49
Zm00001d022010_P004	Maize	plasma membrane, plastid	17.76	16.3
Zm00001d052237_P001	Maize	plastid	17.07	15.28
Zm00001d006751_P001	Maize	vacuole	17.59	14.72

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	UniProt:A0A1D6Q9Q7	ProteinID:AQK55101.1	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	InterPro:Nucellin	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI000842E136	EnsemblPlantsGene:Zm00001d051761
EnsemblPlants:Zm00001d051761_P001	EnsemblPlants:Zm00001d051761_T001	SEG:seg	:	:	:

Description

Aspartyl protease APCB1

Coordinates

chr4:-:168959681..168964507

Molecular Weight (calculated)

64314.4 Da

IEP (calculated)

7.436

GRAVY (calculated)

-0.389

Length

580 amino acids

Sequence
(BLAST)

001: MAPPRPPPNP AGEQQPQLHG VVIITLPPAD QPSKGKTVTA FAYTNDPPPP RSPPDPVMGY PAATEARRRP RRALSTRRVA TAALVLGALA VAAYYCFYSD
101: VAVQFLGMEQ EEEQRNETRS FLLPLYPKAR QGRALREFGD VKLAARRVDD GGRKARNRME VAKAATARTN STALLPIKGN VFPDGQYYTS IFIGNPPRPY
201: FLDVDTGSDL TWIQCDAPCT NCAKGPHPLY KPAKEKIVPP RDLLCQELQG NQNYCETCKQ CDYEIEYADQ SSSMGVLARD DMHMIATNGG REKLDFVFGC
301: AYDQQGQLLS SPAKTDGILG LSSAAISFPS QLASHGIIAN VFGHCITREQ GGGGYMFLGD DYVPRWGVTW TSIRSGPDNL YHTQAHHVKY GDQQLRRPEQ
401: AGSTVQVIFD SGSSYTYLPN EIYENLVAAI KYASPGFVQD TSDRTLPLCW KADFPVREGV HQATMPLDRL PDLNITFFAR YLEDVKQFFE PLNLHFGKKW
501: LFMSKTFTIS PEDYLIISDK GNVCLGLLNG TEINHGSTII VGDVSLRGKL VVYDNQRKQI GWADSDCTKP QSQKGFPFFL

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.