Factsheet for Zm00001d045695_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, cytosol

Predictor Summary:

vacuole 2
extracellular 1
endoplasmic reticulum 2
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, vacuole
Any Predictor:	cytosol, secretory
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19766	Sorghum	cytosol, plastid, vacuole	76.82	78.44
HORVU7Hr1G042490.1	Barley	endoplasmic reticulum, peroxisome, vacuole	50.65	53.35
TraesCS7D01G211000.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	50.28	53.27
TraesCS7A01G208600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.47	52.94
Os06t0268700-01	Rice	vacuole	52.9	52.6
TraesCS7B01G115900.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	49.53	52.17
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	45.98	45.14
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	48.78	45.0
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	39.63	44.82
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	40.37	38.71
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	40.19	38.26
CDY60079	Canola	cytosol	38.5	38.22
KRH39216	Soybean	nucleus, peroxisome, vacuole	40.75	38.11
Bra032272.1-P	Field mustard	cytosol	38.32	38.03
KRH48461	Soybean	nucleus, peroxisome, vacuole	40.0	37.28
Zm00001d004734_P001	Maize	mitochondrion	28.79	37.11
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	38.32	36.41
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	39.25	36.02
Zm00001d023579_P002	Maize	plasma membrane, vacuole	29.16	33.12
Zm00001d012633_P001	Maize	extracellular, plasma membrane, vacuole	22.24	23.38
Zm00001d050521_P001	Maize	vacuole	20.37	21.67
Zm00001d016476_P001	Maize	vacuole	19.81	21.12
Zm00001d052720_P002	Maize	plasma membrane	19.81	20.87
Zm00001d016477_P004	Maize	vacuole	20.19	20.85
Zm00001d044304_P002	Maize	plasma membrane, vacuole	20.19	20.11
Zm00001d022600_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	18.88	19.8
Zm00001d014804_P001	Maize	extracellular	19.63	19.34
Zm00001d004132_P001	Maize	extracellular	18.5	19.11
Zm00001d018074_P001	Maize	vacuole	18.5	19.08
Zm00001d036037_P001	Maize	vacuole	18.88	17.53
Zm00001d022010_P004	Maize	plasma membrane, plastid	20.0	16.93
Zm00001d006751_P001	Maize	vacuole	19.81	15.3
Zm00001d052237_P001	Maize	plastid	17.94	14.81

Protein Annotations

EntrezGene:100280120	MapMan:19.4.3.1	Gene3D:2.40.70.10	ProteinID:AQL03002.1	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	UniProt:K7V855	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF396	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI000221EC7B	EnsemblPlantsGene:Zm00001d045695
EnsemblPlants:Zm00001d045695_P001	EnsemblPlants:Zm00001d045695_T001	SEG:seg	:	:	:

Description

Aspartyl protease APCB1

Coordinates

chr9:+:33746028..33749898

Molecular Weight (calculated)

58383.1 Da

IEP (calculated)

4.764

GRAVY (calculated)

-0.411

Length

535 amino acids

Sequence
(BLAST)

001: MEDDEGKKQH QRIIPNANGH VMIVVPDDAH AHALPASASA PPRDADGPDE ESGDEEERTP AGATSSLWRA AVLALAALAL AAAAYACLYA GGDDDAGAAW
101: RLLEARRQED GGDDEHPGGR TSFLLPLYPK PPRRGGDDWP QNSTLFPHSL AGNLFPEGLY YTAISLGSPP RPYFLDVDTG SHTTWVQCDA PPCASCAKGA
201: HPLYRPARTA DALPASDPLC EGAQHENPNQ CDYEISYADG SSSMGVYVRD SMQFVGEDGE RENADIVFGC GYDQQGVLLN ALETTDGVLG LTNKALSLPT
301: QLASRGIISN AFGHCMSTDP SGAGGYLFLG DDYIPRWGMT WVPIRDGPAD DVRRAQVKQI NHGDQQLNAQ GKLTQVVFDT GSTYTYFPDE ALTRLISSLK
401: EAASPRFVQD DSDKTLPFCM KSDFPVRSVE DVKHFFKPLS LQFEKRFFFS RTFNIRPEHY LVISDKGNVC LGVLNGTTIG YDSVVIVGDV SLRGKLVAYD
501: NDKNEVGWVD FDCTNPRKRS RIPSFLRRAL RNQLL

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.