Factsheet for PGSC0003DMT400010418

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 1
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	95.88	95.2
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	52.15	61.52
KRH39216	Soybean	nucleus, peroxisome, vacuole	52.51	51.22
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	49.1	50.28
KRH48461	Soybean	nucleus, peroxisome, vacuole	51.25	49.83
CDY60079	Canola	cytosol	47.49	49.17
Bra032272.1-P	Field mustard	cytosol	47.31	48.98
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	51.08	48.89
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	48.21	47.78
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	46.06	46.47
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	46.24	46.32
TraesCS6A01G291200.1	Wheat	vacuole	45.52	46.18
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	45.7	45.86
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	45.34	45.59
TraesCS7A01G208600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	41.22	45.1
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	45.88	44.68
Os06t0268700-01	Rice	vacuole	43.01	44.61
TraesCS7D01G211000.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	40.14	44.36
HORVU7Hr1G042490.1	Barley	endoplasmic reticulum, peroxisome, vacuole	39.96	43.9
TraesCS7B01G115900.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	39.61	43.5
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	44.98	43.28
KXG19766	Sorghum	cytosol, plastid, vacuole	38.17	40.65
Zm00001d045695_P001	Maize	cytosol, endoplasmic reticulum, vacuole	38.71	40.37
PGSC0003DMT400037976	Potato	vacuole	29.21	39.0
PGSC0003DMT400080179	Potato	extracellular	27.96	35.7
PGSC0003DMT400030753	Potato	extracellular	27.96	35.37
PGSC0003DMT400071953	Potato	vacuole	18.82	26.18
PGSC0003DMT400027299	Potato	endoplasmic reticulum, golgi, vacuole	19.35	24.83
PGSC0003DMT400034018	Potato	golgi, plasma membrane, vacuole	20.25	23.59
PGSC0003DMT400033805	Potato	extracellular, plasma membrane, vacuole	20.25	22.6
PGSC0003DMT400001138	Potato	plasma membrane	20.07	22.49
PGSC0003DMT400055639	Potato	endoplasmic reticulum, plasma membrane, vacuole	19.0	22.08
PGSC0003DMT400022163	Potato	cytosol, extracellular, plasma membrane	19.71	22.0
PGSC0003DMT400060025	Potato	endoplasmic reticulum, extracellular, vacuole	18.28	21.38
PGSC0003DMT400056847	Potato	vacuole	15.05	20.59
PGSC0003DMT400010765	Potato	cytosol	6.81	20.43
PGSC0003DMT400013994	Potato	vacuole	17.38	20.38
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	17.74	18.37
PGSC0003DMT400022458	Potato	endoplasmic reticulum, extracellular, vacuole	17.56	18.25
PGSC0003DMT400009410	Potato	plasma membrane, vacuole	15.95	17.32
PGSC0003DMT400058018	Potato	vacuole	16.85	17.18
PGSC0003DMT400073638	Potato	plasma membrane	19.53	16.64
PGSC0003DMT400028148	Potato	cytosol	13.62	15.05

Protein Annotations

EntrezGene:102597566	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A25	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009605	GO:GO:0009607	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0050832	InterPro:IPR021109	InterPro:IPR033121
UniProt:M0ZY05	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400004069	PGSC:PGSC0003DMG400004069
EnsemblPlants:PGSC0003DMT400010418	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0002953BCC
RefSeq:XP_006354730.1	SEG:seg	:	:	:	:

Description

Aspartyl protease family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004069]

Coordinates

chr6:-:50937281..50942365

Molecular Weight (calculated)

62384.3 Da

IEP (calculated)

6.354

GRAVY (calculated)

-0.296

Length

558 amino acids

Sequence
(BLAST)

001: MEETKNSPPI QGVVIITLPP PDNPSYGKTI TAFTLSDSPT HQQQQEEEPP QQSQPHNQDL NTGVLRASLE RSFFFRPKIV FGLLGISLIA LSFWSSLTQE
101: TLFELRDVEH DHKSSNSSFI LPLYPKRGGA WNSRRDVEFK LGRFVDFKPD KFMDQEKIAK SLSAATKLDS SVNFPVRGNI HSEGLYYTYM LVGNPPRPYF
201: LDIDTGSDLM WIQCDAPCTS CAKGAHPLYK PRNVNMIPPK NPYCVEVQEN LKSKYCDNCH QCDYEIEYAD RSSSVGVLAK DELQLVLANG TGTKPSVVFG
301: CAYDQQGTLL NTLASTDGIL GLSRAPISLP SQLASHGLIN NVIGHCLRTD TNGGYLFLGN DFVPQWRMSW VPMLNNPFPN LYQAQLMKMN YGGKELRLGS
401: TSYGQGTVVF DSGSTYTYFT DQAYKALISM LEEISSEDLI KDASDTTLPI CWRAKFPVRS IEEVRQFFKP LNLQFGSKWR IVSTKLWIPA EGFLTISEKG
501: NVCLGILDGS NVHDGSAIIL GDISLRGQLF VYDNVNQKIG WIRSNCERPE KVPSLPFS

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.