Factsheet for PGSC0003DMT400028148

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g029230.2.1	Tomato	plasma membrane	60.59	46.5
GSMUA_Achr4P07210_001	Banana	cytosol, plastid, vacuole	46.73	42.14
GSMUA_Achr3P18830_001	Banana	cytosol	44.16	38.99
EER99637	Sorghum	plasma membrane	48.12	38.45
KRH04490	Soybean	vacuole	48.12	38.33
Os07t0592200-02	Rice	plasma membrane	47.52	38.03
PGSC0003DMT400073638	Potato	plasma membrane	48.71	37.56
Zm00001d022010_P004	Maize	plasma membrane, plastid	46.14	36.87
TraesCS2D01G192000.1	Wheat	plasma membrane, plastid, vacuole	46.14	36.87
TraesCS2A01G195800.1	Wheat	plasma membrane	46.14	36.87
GSMUA_Achr4P14240_001	Banana	cytosol, peroxisome, plastid	40.99	36.83
HORVU2Hr1G034720.3	Barley	vacuole	45.94	36.77
TraesCS2B01G210700.2	Wheat	plasma membrane	45.94	36.71
KRH77066	Soybean	endoplasmic reticulum, plasma membrane	46.34	36.28
KRH28412	Soybean	plasma membrane	46.14	35.96
KRH58031	Soybean	plastid	47.92	35.33
Zm00001d006751_P001	Maize	vacuole	45.94	33.48
PGSC0003DMT400010765	Potato	cytosol	8.12	22.04
PGSC0003DMT400071953	Potato	vacuole	16.63	20.95
PGSC0003DMT400027299	Potato	endoplasmic reticulum, golgi, vacuole	17.62	20.46
PGSC0003DMT400001138	Potato	plasma membrane	18.81	19.08
PGSC0003DMT400037976	Potato	vacuole	15.64	18.9
PGSC0003DMT400080179	Potato	extracellular	16.04	18.54
PGSC0003DMT400033805	Potato	extracellular, plasma membrane, vacuole	17.62	17.8
PGSC0003DMT400030753	Potato	extracellular	15.45	17.69
PGSC0003DMT400022163	Potato	cytosol, extracellular, plasma membrane	17.23	17.4
PGSC0003DMT400034018	Potato	golgi, plasma membrane, vacuole	16.44	17.33
PGSC0003DMT400013994	Potato	vacuole	16.24	17.23
PGSC0003DMT400055639	Potato	endoplasmic reticulum, plasma membrane, vacuole	16.24	17.08
PGSC0003DMT400060025	Potato	endoplasmic reticulum, extracellular, vacuole	15.64	16.56
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	16.44	15.4
PGSC0003DMT400009410	Potato	plasma membrane, vacuole	14.26	14.01
PGSC0003DMT400058018	Potato	vacuole	15.05	13.89
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	15.05	13.62
PGSC0003DMT400056847	Potato	vacuole	10.1	12.5
PGSC0003DMT400022458	Potato	endoplasmic reticulum, extracellular, vacuole	12.87	12.1

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
InterPro:IPR033121	UniProt:M1AQR8	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400010857
PGSC:PGSC0003DMG400010857	EnsemblPlants:PGSC0003DMT400028148	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF419	InterPro:Pepsin-like_plant
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI000295DED9	SEG:seg

Description

Aspartic proteinase nepenthesin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400010857]

Coordinates

chr8:-:17906461..17910389

Molecular Weight (calculated)

54904.9 Da

IEP (calculated)

5.604

GRAVY (calculated)

-0.189

Length

505 amino acids

Sequence
(BLAST)

001: MSSTYQPVKC NVNCTCNNDR EQCIYERQYA EMSSSSGVLG EDIVSFGNQS ELAPHRAVFG CENLKTGDLY SQHANGIMGL GQGDLSIVDQ FVEKHVISDS
101: FSLCYSGMDF GGGAMVLGGI NPPSEMVFTH SDPLRRNLGV ITNTLDKSYA FTLVSDGNNL YYNIELKGIH VAGKALNLNP QSFDGKHGTV LDSGTIYVYL
201: PEAAFVAFKS VVMKELHSLR EIEGPDPNYK YICFSDAGSS PSRSKFLISG SFKGAGAYCF GIFQNGKDPT TLLGGIIVRN TVVSYDRENA RIGFWKTNCS
301: KLWDTLNVSS SPPHPSLPSG MDNTNSTAYM TPALAPSEPL EYYAPAAYPT SKSSITIDRL SVGYILQYPI KLGLNQKLLP TDKSFIATDA SSAAPDDSSV
401: ATEGLPVGYI LQYQTTLGKN QKLVTTDEPF IATYKPSAAP EDSSVATYGL PVEYMLQYQA KLGQNQKFVQ TGKSYIATYQ LLVPTNQLFV ATHDSFVKTI
501: DLHVG

Best Arabidopsis Sequence Match ( AT3G50050.1 )
(BLAST)

001: MALPSISSIG ATFSLLIYLS LPYSITAGEN NLLHQSPTAR SRRPMVFPLF LSQPNSSSRS ISIPHRKLHK SDSKSLPHSR MRLYDDLLIN GYYTTRLWIG
101: TPPQMFALIV DSGSTVTYVP CSDCEQCGKH QDPKFQPEMS STYQPVKCNM DCNCDDDREQ CVYEREYAEH SSSKGVLGED LISFGNESQL TPQRAVFGCE
201: TVETGDLYSQ RADGIIGLGQ GDLSLVDQLV DKGLISNSFG LCYGGMDVGG GSMILGGFDY PSDMVFTDSD PDRSPYYNID LTGIRVAGKQ LSLHSRVFDG
301: EHGAVLDSGT TYAYLPDAAF AAFEEAVMRE VSTLKQIDGP DPNFKDTCFQ VAASNYVSEL SKIFPSVEMV FKSGQSWLLS PENYMFRHSK VHGAYCLGVF
401: PNGKDHTTLL GGIVVRNTLV VYDRENSKVG FWRTNCSELS DRLHIDGAPP PATLPSNDSN PSHNSSSNLS GVTQVGQINL DIQLTVNSSY LKPRIEDLSK
501: IFSKELDVKS SQVSLSNLTS KGNESLVRMV VLPPEPSTWF SNVTATNIVS RFTNHQIKLP EIFGNYQLVN YKLEPPRKRT NNNIVVIAIG IIAVIVGLSA
601: YGAWLIWKRK QTSIPYKPVD EAIVAEQELQ PI

Arabidopsis Description

At3g50050 [Source:UniProtKB/TrEMBL;Acc:Q9SN13]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.