Factsheet for PGSC0003DMT400022458

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g054490.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	97.02	97.02
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	63.5	64.34
KRG97610	Soybean	golgi, plasma membrane, vacuole	58.29	60.19
KRH31262	Soybean	extracellular, vacuole	58.29	60.08
PGSC0003DMT400056847	Potato	vacuole	42.83	56.37
CDY21633	Canola	cytosol	42.27	55.64
Bra009059.1-P	Field mustard	plasma membrane, vacuole	52.33	54.35
AT5G10080.1	Thale cress	vacuole	53.26	54.17
CDX69862	Canola	plasma membrane, vacuole	52.14	54.16
CDY21629	Canola	plastid, vacuole	51.96	53.86
GSMUA_Achr5P22890_001	Banana	endoplasmic reticulum, plasma membrane	50.84	52.6
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	51.77	52.35
Zm00001d018074_P001	Maize	vacuole	48.6	50.29
TraesCS6D01G282400.2	Wheat	plasma membrane	47.86	50.1
Os02t0751100-01	Rice	plasma membrane	48.42	50.0
KXG30744	Sorghum	extracellular, vacuole	48.04	49.71
TraesCS6B01G332100.2	Wheat	plasma membrane	47.67	49.71
TraesCS6A01G302800.2	Wheat	plasma membrane	47.3	49.42
HORVU6Hr1G075110.2	Barley	plastid	47.11	45.5
Zm00001d052237_P001	Maize	plastid	47.3	39.2
PGSC0003DMT400010765	Potato	cytosol	12.48	36.02
PGSC0003DMT400009410	Potato	plasma membrane, vacuole	34.08	35.6
PGSC0003DMT400058018	Potato	vacuole	35.75	35.1
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	34.64	34.51
PGSC0003DMT400027299	Potato	endoplasmic reticulum, golgi, vacuole	19.37	23.91
PGSC0003DMT400001138	Potato	plasma membrane	21.42	23.09
PGSC0003DMT400013994	Potato	vacuole	20.3	22.9
PGSC0003DMT400060025	Potato	endoplasmic reticulum, extracellular, vacuole	20.11	22.64
PGSC0003DMT400034018	Potato	golgi, plasma membrane, vacuole	19.93	22.34
PGSC0003DMT400055639	Potato	endoplasmic reticulum, plasma membrane, vacuole	19.74	22.08
PGSC0003DMT400037976	Potato	vacuole	17.13	22.01
PGSC0003DMT400033805	Potato	extracellular, plasma membrane, vacuole	20.48	22.0
PGSC0003DMT400030753	Potato	extracellular	18.06	22.0
PGSC0003DMT400071953	Potato	vacuole	16.39	21.95
PGSC0003DMT400080179	Potato	extracellular	17.32	21.28
PGSC0003DMT400022163	Potato	cytosol, extracellular, plasma membrane	19.55	21.0
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	18.25	17.56
PGSC0003DMT400073638	Potato	plasma membrane	18.25	14.96
PGSC0003DMT400028148	Potato	cytosol	12.1	12.87

Protein Annotations

EntrezGene:102583826	MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
GO:GO:0046658	InterPro:IPR021109	InterPro:IPR033121	UniProt:M1AGR3	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400008703	PGSC:PGSC0003DMG400008703	EnsemblPlants:PGSC0003DMT400022458	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF303	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM
InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002966B5C	RefSeq:XP_006363946.1	SEG:seg	:

Description

Aspartic proteinase nepenthesin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400008703]

Coordinates

chr4:-:52488903..52498446

Molecular Weight (calculated)

58439.4 Da

IEP (calculated)

6.068

GRAVY (calculated)

-0.128

Length

537 amino acids

Sequence
(BLAST)

001: MEIWKVGFVA MVLGLSILVE CGVSDMYSSK LVHRFSDEVR KVRVSRNGEV GVVWPQHRSF EYYGKLMNSD LQRQKMKLGP QFQLLFPSQG SKTMPLGNDF
101: GWLHYMWVDI GTPNVSFLVA LDAGSDLLWV PCECVQCAPL SASYYSSLDK DLNEYNPSGS STSKFLSCSH QLCELGSNCK NPKQPCPYTV NYVSEDTSTS
201: GVLVEDILHL ASGNRMAANG SARAPVTFGC GSKQTGGYLN GVAPDGLMGL GPGEISVPSR LAKAGLVRNS FSLCFKEDDS GRIFFGDQGP AGQQTTSFLP
301: SEGQFVTYVV GVESCCFGSS CIEQTSFKAI VDSGSSFTFL PDQIYDRVVK EFDRKVNATK ASFEGYPWQY CYKSSSEVLP KIPSFTLKFT ANSSFIVQDP
401: VFMIYGSQGA VGFCLAVEPS GIEIGTIGQN FMTGYRMVFD RENLKLGWSR SDCEDLTDNN KLPLAPADGN SPNSLPAEQQ NTPNSSGVAP AVAGKTPSNS
501: AAPTSRGMPS KLCLTKLLFQ LLLVSSNFRW SLNTFTL

Best Arabidopsis Sequence Match ( AT5G10080.1 )
(BLAST)

001: MVSRSAFLLF CVLFLATEET LASLFSSRLI HRFSDEGRAS IKTPSSSDSL PNKQSLEYYR LLAESDFRRQ RMNLGAKVQS LVPSEGSKTI SSGNDFGWLH
101: YTWIDIGTPS VSFLVALDTG SNLLWIPCNC VQCAPLTSTY YSSLATKDLN EYNPSSSSTS KVFLCSHKLC DSASDCESPK EQCPYTVNYL SGNTSSSGLL
201: VEDILHLTYN TNNRLMNGSS SVKARVVIGC GKKQSGDYLD GVAPDGLMGL GPAEISVPSF LSKAGLMRNS FSLCFDEEDS GRIYFGDMGP SIQQSTPFLQ
301: LDNNKYSGYI VGVEACCIGN SCLKQTSFTT FIDSGQSFTY LPEEIYRKVA LEIDRHINAT SKNFEGVSWE YCYESSAEPK VPAIKLKFSH NNTFVIHKPL
401: FVFQQSQGLV QFCLPISPSG QEGIGSIGQN YMRGYRMVFD RENMKLGWSP SKCQEDKIEP PQASPGSTSS PNPLPTDEQQ SRGGHAVSPA IAGKTPSKTP
501: SSSSSYSFSS IMRLFNSLLL LHWLASLM

Arabidopsis Description

Aspartic proteinase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX20]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.