Factsheet for HORVU6Hr1G072910.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G321200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	96.2	95.68
TraesCS6A01G291200.1	Wheat	vacuole	94.94	95.45
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	95.66	95.32
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	81.01	80.43
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	82.46	79.58
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	79.75	76.03
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	58.41	59.27
HORVU7Hr1G042490.1	Barley	endoplasmic reticulum, peroxisome, vacuole	53.53	58.27
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	44.3	51.8
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	46.47	46.06
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	46.29	45.55
Bra032272.1-P	Field mustard	cytosol	43.22	44.34
CDY60079	Canola	cytosol	43.22	44.34
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	44.12	43.34
KRH39216	Soybean	nucleus, peroxisome, vacuole	44.67	43.18
KRH48461	Soybean	nucleus, peroxisome, vacuole	44.48	42.86
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	44.67	42.37
HORVU4Hr1G017390.1	Barley	vacuole	29.11	39.08
HORVU5Hr1G037120.7	Barley	plasma membrane, vacuole	30.38	37.25
HORVU7Hr1G006700.1	Barley	extracellular	24.05	33.5
HORVU4Hr1G088530.1	Barley	golgi, mitochondrion, vacuole	22.78	29.37
HORVU7Hr1G108870.2	Barley	plasma membrane	19.53	22.78
HORVU5Hr1G120740.15	Barley	plastid	19.35	20.7
HORVU2Hr1G066860.8	Barley	vacuole	18.99	20.43
HORVU3Hr1G076190.6	Barley	mitochondrion	17.72	19.64
HORVU6Hr1G075110.2	Barley	plastid	19.17	19.06
HORVU7Hr1G118020.3	Barley	extracellular, plasma membrane, vacuole	17.72	18.25
HORVU3Hr1G023700.2	Barley	plasma membrane	15.73	18.16
HORVU5Hr1G084490.1	Barley	vacuole	18.08	18.05
HORVU2Hr1G034720.3	Barley	vacuole	17.9	15.69

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G072910	EnsemblPlants:HORVU6Hr1G072910.3	InterPro:IPR021109	InterPro:IPR033121	UniProt:M0Z539
InterPro:Nucellin	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI000296AC79	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:506193822..506198034

Molecular Weight (calculated)

60591.8 Da

IEP (calculated)

6.725

GRAVY (calculated)

-0.393

Length

553 amino acids

Sequence
(BLAST)

001: MPMPSPSPSP PPPPEPPQLH GVVIITLPPP DQPSKGKTIT AFTYTDEPGA GAPSPPHPHR GPPMAAAGRE ARRSRRAGSP RRAAAMVLAL GALALAAYYS
101: FYSDVAVQFL GMEEEEAQRE RNETKSFLFQ LYPKAHQGRG LREFGDIKLA AKRVDDGGRK VTKKLDVKGA ASAGTNSTVL LPIKGNVFPD GQYYTSIFVG
201: NPPRPYFLDV DTGSDLTWIQ CDAPCTNCAK GPHPLYKPAK EKIVPPRDSL CQELQGDQNY CETCKQCDYE IEYADRSSSM GVLAKDDMHL IATNGGREKL
301: DFVFGCAYDQ QGQLLSSPAK TDGILGLSSA AISLPSQLAS KGIISNVFGH CITRETNGGG YMFLGDDYVP RWGMTWAPIR GGPDNLYHTE AQKVNYGDQE
401: LHAGNSVQVI FDSGSSYTYL PEEMYKNLID AIKEDSPSFV QDSSDTTLPL CWKADFSVRS FFKPLNLHFG RRWFVVPKTF TIVPDDYLII SDKGNVCLGL
501: LNGTEINHGS TIIVGDVSLR GKLVVYDNER RQIGWANSEC TKPQSQKGFP FFL

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.