Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60079 | Canola | cytosol | 72.56 | 78.48 |
| CDY04326 | Canola | cytosol, endoplasmic reticulum, vacuole | 75.64 | 78.33 |
| Bra032272.1-P | Field mustard | cytosol | 72.38 | 78.29 |
| VIT_17s0000g03880.t01 | Wine grape | extracellular, plasma membrane, vacuole | 48.03 | 59.2 |
| KRH39216 | Soybean | nucleus, peroxisome, vacuole | 50.43 | 51.4 |
| PGSC0003DMT400010418 | Potato | cytosol, nucleus, vacuole | 48.89 | 51.08 |
| Solyc06g069190.2.1 | Tomato | cytosol, nucleus, vacuole | 48.89 | 50.71 |
| KRH48461 | Soybean | nucleus, peroxisome, vacuole | 49.57 | 50.35 |
| GSMUA_Achr6P30620_001 | Banana | cytosol, nucleus, vacuole | 46.66 | 49.91 |
| EES05585 | Sorghum | endoplasmic reticulum, peroxisome, plastid, vacuole | 44.25 | 46.32 |
| TraesCS6A01G291200.1 | Wheat | vacuole | 42.37 | 44.91 |
| HORVU6Hr1G072910.3 | Barley | cytosol, endoplasmic reticulum, peroxisome | 42.37 | 44.67 |
| TraesCS6B01G321200.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 42.2 | 44.24 |
| TraesCS6D01G272600.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 41.85 | 43.96 |
| Os02t0730700-02 | Rice | cytosol, peroxisome, vacuole | 43.05 | 43.8 |
| Zm00001d051761_P001 | Maize | endoplasmic reticulum, peroxisome, vacuole | 42.71 | 42.93 |
| HORVU7Hr1G042490.1 | Barley | endoplasmic reticulum, peroxisome, vacuole | 36.54 | 41.93 |
| TraesCS7A01G208600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.54 | 41.76 |
| TraesCS7B01G115900.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 36.19 | 41.54 |
| TraesCS7D01G211000.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 35.68 | 41.19 |
| AT1G44130.1 | Thale cress | vacuole | 28.47 | 40.99 |
| Os06t0268700-01 | Rice | vacuole | 37.74 | 40.89 |
| KXG19766 | Sorghum | cytosol, plastid, vacuole | 36.71 | 40.84 |
| Zm00001d045695_P001 | Maize | cytosol, endoplasmic reticulum, vacuole | 36.02 | 39.25 |
| AT4G33490.2 | Thale cress | endoplasmic reticulum, golgi, vacuole | 28.13 | 38.59 |
| AT1G77480.1 | Thale cress | golgi, plastid, vacuole | 27.96 | 34.98 |
| AT3G02740.1 | Thale cress | vacuole | 19.38 | 23.16 |
| AT5G22850.1 | Thale cress | plasma membrane | 19.38 | 22.92 |
| AT2G36670.1 | Thale cress | plasma membrane | 20.07 | 22.85 |
| AT1G65240.1 | Thale cress | golgi, plasma membrane, vacuole | 18.52 | 22.74 |
| AT1G05840.1 | Thale cress | plasma membrane | 18.87 | 22.68 |
| AT5G36260.1 | Thale cress | extracellular, plasma membrane, vacuole | 18.18 | 21.99 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 18.18 | 20.66 |
| AT3G51360.9 | Thale cress | vacuole | 16.81 | 19.68 |
| AT1G08210.3 | Thale cress | extracellular | 18.18 | 19.63 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 17.15 | 18.94 |
| AT4G35880.1 | Thale cress | plasma membrane | 16.98 | 18.89 |
| AT3G42550.1 | Thale cress | vacuole | 13.89 | 18.84 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 16.98 | 18.71 |
| AT3G50050.1 | Thale cress | plasma membrane, vacuole | 19.55 | 18.04 |
| AT3G51340.1 | Thale cress | plasma membrane | 16.3 | 17.92 |
| AT5G10080.1 | Thale cress | vacuole | 16.12 | 17.8 |
| AT5G43100.1 | Thale cress | plasma membrane | 18.01 | 16.64 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:841328 | MEROPS:A01.A25 | ProteinID:AAF69716.1 | ProteinID:AEE32388.1 |
| ProteinID:AEE32389.1 | EMBL:AF360182 | ArrayExpress:AT1G49050 | EnsemblPlantsGene:AT1G49050 | RefSeq:AT1G49050 | TAIR:AT1G49050 |
| RefSeq:AT1G49050-TAIR-G | EnsemblPlants:AT1G49050.1 | TAIR:AT1G49050.1 | EMBL:AY039998 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS |
| Unigene:At.20904 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0006508 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0030163 | GO:GO:0050832 | InterPro:IPR021109 | InterPro:IPR033121 | RefSeq:NP_001077691.1 |
| RefSeq:NP_564539.1 | InterPro:Nucellin | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF334 | InterPro:Peptidase_aspartic_dom_sf |
| UniProt:Q9M9A8 | SUPFAM:SSF50630 | InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI00000A56E1 |
| SEG:seg | : | : | : | : | : |
Description
APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
Coordinates
chr1:+:18150467..18153364
Molecular Weight (calculated)
65352.4 Da
IEP (calculated)
4.891
GRAVY (calculated)
-0.302
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.