Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035522.1-P | Field mustard | vacuole | 76.56 | 86.01 |
| CDY63001 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 85.27 | 85.09 |
| CDY37650 | Canola | extracellular, golgi | 85.06 | 84.89 |
| CDY41753 | Canola | golgi, plasma membrane, vacuole | 84.65 | 84.65 |
| Bra035359.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 84.65 | 84.47 |
| CDY68869 | Canola | extracellular, vacuole | 73.44 | 81.19 |
| CDY51094 | Canola | extracellular, vacuole | 77.59 | 80.26 |
| Bra039497.1-P | Field mustard | extracellular, vacuole | 76.97 | 75.56 |
| CDY38557 | Canola | cytosol, plastid | 42.53 | 75.37 |
| AT1G65240.1 | Thale cress | golgi, plasma membrane, vacuole | 68.05 | 69.05 |
| KRG92565 | Soybean | cytosol | 32.37 | 54.17 |
| KRH34227 | Soybean | plasma membrane | 51.24 | 52.0 |
| PGSC0003DMT400027299 | Potato | endoplasmic reticulum, golgi, vacuole | 46.47 | 51.49 |
| VIT_04s0023g00730.t01 | Wine grape | plasma membrane, vacuole | 50.62 | 50.83 |
| KRH00937 | Soybean | plasma membrane | 50.41 | 50.52 |
| Solyc04g056590.2.1 | Tomato | golgi, plasma membrane, vacuole | 50.41 | 50.31 |
| AT3G02740.1 | Thale cress | vacuole | 50.83 | 50.2 |
| GSMUA_Achr6P27900_001 | Banana | golgi, vacuole | 49.38 | 49.17 |
| GSMUA_Achr3P17250_001 | Banana | plasma membrane, vacuole | 49.17 | 48.87 |
| KRH40286 | Soybean | golgi, plasma membrane, vacuole | 50.21 | 48.79 |
| Solyc03g058400.2.1 | Tomato | vacuole | 48.34 | 48.74 |
| PGSC0003DMT400013994 | Potato | vacuole | 47.3 | 47.9 |
| PGSC0003DMT400060025 | Potato | endoplasmic reticulum, extracellular, vacuole | 47.3 | 47.8 |
| Solyc05g055800.2.1 | Tomato | extracellular, vacuole | 47.3 | 47.8 |
| Os04t0337000-01 | Rice | mitochondrion | 31.74 | 47.66 |
| EES03170 | Sorghum | plasma membrane, vacuole | 48.34 | 47.65 |
| TraesCS2D01G273200.1 | Wheat | extracellular, plasma membrane, vacuole | 48.13 | 47.54 |
| TraesCS2A01G275000.1 | Wheat | extracellular, plasma membrane, vacuole | 47.72 | 47.13 |
| TraesCS2B01G291900.1 | Wheat | extracellular, plasma membrane, vacuole | 47.51 | 46.93 |
| OQU84933 | Sorghum | extracellular, vacuole | 46.89 | 46.12 |
| EES14146 | Sorghum | plasma membrane | 47.1 | 46.04 |
| Os02t0473200-01 | Rice | plasma membrane | 47.1 | 45.95 |
| AT1G05840.1 | Thale cress | plasma membrane | 46.06 | 45.77 |
| TraesCS7A01G395300.1 | Wheat | vacuole | 46.06 | 45.31 |
| TraesCS7D01G390900.1 | Wheat | vacuole | 45.85 | 45.1 |
| TraesCS7B01G297200.2 | Wheat | plasma membrane, vacuole | 46.27 | 44.96 |
| Zm00001d052720_P002 | Maize | plasma membrane | 46.89 | 44.49 |
| Zm00001d016477_P004 | Maize | vacuole | 47.51 | 44.21 |
| Zm00001d050521_P001 | Maize | vacuole | 45.85 | 43.94 |
| Os04t0334951-01 | Rice | extracellular | 38.8 | 43.19 |
| Zm00001d016476_P001 | Maize | vacuole | 44.4 | 42.63 |
| Zm00001d044304_P002 | Maize | plasma membrane, vacuole | 47.3 | 42.46 |
| HORVU2Hr1G066860.8 | Barley | vacuole | 45.23 | 42.41 |
| Os04t0334700-01 | Rice | extracellular | 39.83 | 39.83 |
| Os04t0336600-00 | Rice | extracellular | 39.83 | 39.83 |
| AT5G22850.1 | Thale cress | plasma membrane | 36.1 | 35.29 |
| AT2G36670.1 | Thale cress | plasma membrane | 33.82 | 31.84 |
| AT1G08210.3 | Thale cress | extracellular | 34.85 | 31.11 |
| AT3G42550.1 | Thale cress | vacuole | 24.27 | 27.21 |
| AT1G44130.1 | Thale cress | vacuole | 19.71 | 23.46 |
| AT4G33490.2 | Thale cress | endoplasmic reticulum, golgi, vacuole | 20.12 | 22.82 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 23.44 | 21.36 |
| AT5G10080.1 | Thale cress | vacuole | 23.24 | 21.21 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 22.82 | 20.83 |
| AT4G35880.1 | Thale cress | plasma membrane | 22.61 | 20.8 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 21.58 | 20.27 |
| AT3G51340.1 | Thale cress | plasma membrane | 22.2 | 20.19 |
| AT3G51360.9 | Thale cress | vacuole | 20.33 | 19.68 |
| AT5G43100.1 | Thale cress | plasma membrane | 25.52 | 19.49 |
| AT1G77480.1 | Thale cress | golgi, plastid, vacuole | 18.67 | 19.31 |
| AT3G50050.1 | Thale cress | plasma membrane, vacuole | 25.1 | 19.15 |
| AT1G49050.1 | Thale cress | cytosol, plastid, vacuole | 21.99 | 18.18 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:833623 | MEROPS:A01.A58 | ProteinID:AED94063.1 | ArrayExpress:AT5G36260 |
| EnsemblPlantsGene:AT5G36260 | RefSeq:AT5G36260 | TAIR:AT5G36260 | RefSeq:AT5G36260-TAIR-G | EnsemblPlants:AT5G36260.1 | TAIR:AT5G36260.1 |
| InterPro:Aspartic_peptidase_A1 | EMBL:BT023424 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0031225 | InterPro:IPR021109 |
| InterPro:IPR033121 | RefSeq:NP_198475.2 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PO:PO:0000084 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00792 | PFscan:PS51767 |
| PANTHER:PTHR13683 | PANTHER:PTHR13683:SF519 | InterPro:Pepsin-like_plant | InterPro:Peptidase_aspartic_dom_sf | UniProt:Q4V3D2 | SUPFAM:SSF50630 |
| InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI0000196F8E | SEG:seg | : |
Description
At5g36260 [Source:UniProtKB/TrEMBL;Acc:Q4V3D2]
Coordinates
chr5:-:14284832..14288409
Molecular Weight (calculated)
51983.9 Da
IEP (calculated)
4.905
GRAVY (calculated)
0.015
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTTMDPSRI SRIVAVVFVL VIQVVSGNFV FNVTHKFAGK EKQLSELKSH DSFRHARMLA NIDLPLGGDS RADSIGLYFT KIKLGSPPKE YYVQVDTGSD
101: ILWVNCAPCP KCPVKTDLGI PLSLYDSKTS STSKNVGCED DFCSFIMQSE TCGAKKPCSY HVVYGDGSTS DGDFIKDNIT LEQVTGNLRT APLAQEVVFG
201: CGKNQSGQLG QTDSAVDGIM GFGQSNTSII SQLAAGGSTK RIFSHCLDNM NGGGIFAVGE VESPVVKTTP IVPNQVHYNV ILKGMDVDGD PIDLPPSLAS
301: TNGDGGTIID SGTTLAYLPQ NLYNSLIEKI TAKQQVKLHM VQETFACFSF TSNTDKAFPV VNLHFEDSLK LSVYPHDYLF SLREDMYCFG WQSGGMTTQD
401: GADVILLGDL VLSNKLVVYD LENEVIGWAD HNCSSSIKVK DGSGAAYQLG AENLISAASS VMNGTLVTLL SILIWVFHSF TS
101: ILWVNCAPCP KCPVKTDLGI PLSLYDSKTS STSKNVGCED DFCSFIMQSE TCGAKKPCSY HVVYGDGSTS DGDFIKDNIT LEQVTGNLRT APLAQEVVFG
201: CGKNQSGQLG QTDSAVDGIM GFGQSNTSII SQLAAGGSTK RIFSHCLDNM NGGGIFAVGE VESPVVKTTP IVPNQVHYNV ILKGMDVDGD PIDLPPSLAS
301: TNGDGGTIID SGTTLAYLPQ NLYNSLIEKI TAKQQVKLHM VQETFACFSF TSNTDKAFPV VNLHFEDSLK LSVYPHDYLF SLREDMYCFG WQSGGMTTQD
401: GADVILLGDL VLSNKLVVYD LENEVIGWAD HNCSSSIKVK DGSGAAYQLG AENLISAASS VMNGTLVTLL SILIWVFHSF TS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.