Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_12s0028g02240.t01 | |
| VIT_18s0001g09830.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G02740.1 | VIT_12s0028g02240.t01 | AT2G42580.1 | 19000166 |
| AT3G02740.1 | VIT_18s0001g09830.t01 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92565 | Soybean | cytosol | 41.04 | 68.4 |
| KRH34227 | Soybean | plasma membrane | 63.96 | 64.63 |
| PGSC0003DMT400027299 | Potato | endoplasmic reticulum, golgi, vacuole | 55.62 | 61.38 |
| GSMUA_Achr6P27900_001 | Banana | golgi, vacuole | 61.46 | 60.95 |
| Solyc04g056590.2.1 | Tomato | golgi, plasma membrane, vacuole | 60.83 | 60.46 |
| Os04t0337000-01 | Rice | mitochondrion | 38.75 | 57.94 |
| KRH00937 | Soybean | plasma membrane | 57.92 | 57.8 |
| GSMUA_Achr3P17250_001 | Banana | plasma membrane, vacuole | 58.33 | 57.73 |
| AT3G02740.1 | Thale cress | vacuole | 57.71 | 56.76 |
| PGSC0003DMT400060025 | Potato | endoplasmic reticulum, extracellular, vacuole | 56.25 | 56.6 |
| Solyc05g055800.2.1 | Tomato | extracellular, vacuole | 55.42 | 55.77 |
| Bra040597.1-P | Field mustard | vacuole | 56.67 | 55.62 |
| VIT_05s0062g01370.t01 | Wine grape | plasma membrane, vacuole | 58.12 | 55.58 |
| KRH40286 | Soybean | golgi, plasma membrane, vacuole | 57.29 | 55.44 |
| CDY51538 | Canola | vacuole | 56.46 | 55.42 |
| CDY28705 | Canola | vacuole | 56.25 | 55.1 |
| Os02t0473200-01 | Rice | plasma membrane | 56.46 | 54.86 |
| OQU84933 | Sorghum | extracellular, vacuole | 55.83 | 54.69 |
| TraesCS7A01G395300.1 | Wheat | vacuole | 55.62 | 54.49 |
| TraesCS7B01G297200.2 | Wheat | plasma membrane, vacuole | 56.25 | 54.44 |
| PGSC0003DMT400013994 | Potato | vacuole | 53.75 | 54.2 |
| EES03170 | Sorghum | plasma membrane, vacuole | 55.21 | 54.19 |
| TraesCS7D01G390900.1 | Wheat | vacuole | 55.21 | 54.08 |
| CDY38557 | Canola | cytosol, plastid | 30.62 | 54.04 |
| Bra035522.1-P | Field mustard | vacuole | 48.12 | 53.85 |
| TraesCS2D01G273200.1 | Wheat | extracellular, plasma membrane, vacuole | 53.96 | 53.07 |
| TraesCS2A01G275000.1 | Wheat | extracellular, plasma membrane, vacuole | 53.96 | 53.07 |
| TraesCS2B01G291900.1 | Wheat | extracellular, plasma membrane, vacuole | 53.75 | 52.87 |
| Solyc03g058400.2.1 | Tomato | vacuole | 52.5 | 52.72 |
| CDY41753 | Canola | golgi, plasma membrane, vacuole | 52.5 | 52.28 |
| EES14146 | Sorghum | plasma membrane | 53.54 | 52.13 |
| CDY55968 | Canola | plasma membrane | 51.25 | 52.12 |
| CDY12353 | Canola | plasma membrane | 51.25 | 52.12 |
| Bra040466.1-P | Field mustard | plasma membrane | 51.25 | 52.12 |
| CDY37650 | Canola | extracellular, golgi | 52.29 | 51.97 |
| CDY51094 | Canola | extracellular, vacuole | 50.42 | 51.93 |
| CDY53740 | Canola | vacuole | 43.75 | 51.85 |
| CDY68869 | Canola | extracellular, vacuole | 47.08 | 51.83 |
| CDY63001 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 52.08 | 51.76 |
| Bra035359.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 52.08 | 51.76 |
| AT5G36260.1 | Thale cress | extracellular, plasma membrane, vacuole | 50.83 | 50.62 |
| Zm00001d050521_P001 | Maize | vacuole | 52.92 | 50.5 |
| Zm00001d052720_P002 | Maize | plasma membrane | 52.92 | 50.0 |
| Bra039497.1-P | Field mustard | extracellular, vacuole | 50.83 | 49.69 |
| AT1G65240.1 | Thale cress | golgi, plasma membrane, vacuole | 49.17 | 49.68 |
| Zm00001d016477_P004 | Maize | vacuole | 53.33 | 49.42 |
| Bra021415.1-P | Field mustard | vacuole | 40.83 | 49.25 |
| HORVU2Hr1G066860.8 | Barley | vacuole | 52.71 | 49.22 |
| Zm00001d044304_P002 | Maize | plasma membrane, vacuole | 55.0 | 49.16 |
| Os04t0334951-01 | Rice | extracellular | 41.88 | 46.42 |
| Zm00001d016476_P001 | Maize | vacuole | 48.54 | 46.41 |
| Os04t0334700-01 | Rice | extracellular | 42.08 | 41.91 |
| Os04t0336600-00 | Rice | extracellular | 42.08 | 41.91 |
| VIT_06s0061g01030.t01 | Wine grape | vacuole | 38.12 | 37.81 |
| VIT_08s0007g04390.t01 | Wine grape | extracellular, plasma membrane, vacuole | 37.71 | 36.06 |
| VIT_07s0031g02620.t01 | Wine grape | extracellular, plasma membrane | 23.54 | 26.53 |
| VIT_18s0001g02420.t01 | Wine grape | vacuole | 22.71 | 26.14 |
| VIT_17s0000g03880.t01 | Wine grape | extracellular, plasma membrane, vacuole | 23.54 | 23.89 |
| VIT_00s0434g00080.t01 | Wine grape | plasma membrane, vacuole | 24.17 | 22.39 |
| VIT_18s0001g04790.t01 | Wine grape | plasma membrane, plastid, vacuole | 23.75 | 21.88 |
| VIT_07s0129g00600.t01 | Wine grape | extracellular | 28.33 | 21.48 |
| VIT_18s0001g09470.t01 | Wine grape | plasma membrane, vacuole | 28.33 | 20.64 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 13.12 | 20.59 |
| VIT_07s0031g01170.t01 | Wine grape | extracellular, plasma membrane, vacuole | 22.71 | 20.57 |
Protein Annotations
| EntrezGene:100256470 | wikigene:100256470 | MapMan:19.4.3.1 | Gene3D:2.40.70.10 | MEROPS:A01.A34 | InterPro:Aspartic_peptidase_A1 |
| ProteinID:CBI17611 | ProteinID:CBI17611.3 | UniProt:D7SPN2 | EMBL:FN594959 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
| InterPro:IPR021109 | InterPro:IPR033121 | EntrezGene:LOC100256470 | wikigene:LOC100256470 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 |
| PFAM:PF14543 | PRINTS:PR00792 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF288 | InterPro:Pepsin-like_plant |
| InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix |
| UniParc:UPI00015CA465 | ArrayExpress:VIT_04s0023g00730 | EnsemblPlantsGene:VIT_04s0023g00730 | EnsemblPlants:VIT_04s0023g00730.t01 | unigene:Vvi.9479 | RefSeq:XP_002277058 |
| RefSeq:XP_002277058.2 | RefSeq:XP_002277082 | RefSeq:XP_002277082.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:-:17094959..17107450
Molecular Weight (calculated)
52099.8 Da
IEP (calculated)
4.931
GRAVY (calculated)
-0.045
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLGRWVLCF CLLALFLPTI VSGNAVFRVQ HKFKGRGKSL DALRAHDTRR HGRILSAVDL PLGGNGHPSE AGLYFAKIGI GTPSKDYYVQ VDTGSDILWV
101: NCAGCDRCPT KSDLGVDLTL YDMKASTTSD AVGCDDNFCS LYDGPLPGCK PGLQCLYSVL YGDGSSTTGY FVQDFVQYNR ISGNFQTTPT NGTVVFGCGN
201: KQSGELGSSS EALDGILGFG QANSSMLSQL ASSGKVKKVF SHCLDNVDGG GIFAIGEVVE PKVNITPLVQ NQAHYNVVMK EIEVGGDPLD VPSDAFESGD
301: RKGTIIDSGT TLAYFPQEVY VPLIEKILSQ QPDLRLHTVE QAFTCFDYTG NVDDGFPTVT LHFDKSISLT VYPHEYLFQV KEFEWCIGWQ NSGAQTKDGK
401: DLTLLGDLVL SNKLVVYDLE KQGIGWVEYN CSSSIKVKDE RSGSVFRVGA HDLSSSYSLT SGSILISLLL PIAMLHSFIY
101: NCAGCDRCPT KSDLGVDLTL YDMKASTTSD AVGCDDNFCS LYDGPLPGCK PGLQCLYSVL YGDGSSTTGY FVQDFVQYNR ISGNFQTTPT NGTVVFGCGN
201: KQSGELGSSS EALDGILGFG QANSSMLSQL ASSGKVKKVF SHCLDNVDGG GIFAIGEVVE PKVNITPLVQ NQAHYNVVMK EIEVGGDPLD VPSDAFESGD
301: RKGTIIDSGT TLAYFPQEVY VPLIEKILSQ QPDLRLHTVE QAFTCFDYTG NVDDGFPTVT LHFDKSISLT VYPHEYLFQV KEFEWCIGWQ NSGAQTKDGK
401: DLTLLGDLVL SNKLVVYDLE KQGIGWVEYN CSSSIKVKDE RSGSVFRVGA HDLSSSYSLT SGSILISLLL PIAMLHSFIY
001: MDLRRRQWFL SAILLSAALL IDPQFSTAAT ASENLVFEVR SKFAGKRVKD LGALRAHDVH RHSRLLSAID IPLGGDSQPE SIGLYFAKIG LGTPSRDFHV
101: QVDTGSDILW VNCAGCIRCP RKSDLVELTP YDVDASSTAK SVSCSDNFCS YVNQRSECHS GSTCQYVIMY GDGSSTNGYL VKDVVHLDLV TGNRQTGSTN
201: GTIIFGCGSK QSGQLGESQA AVDGIMGFGQ SNSSFISQLA SQGKVKRSFA HCLDNNNGGG IFAIGEVVSP KVKTTPMLSK SAHYSVNLNA IEVGNSVLEL
301: SSNAFDSGDD KGVIIDSGTT LVYLPDAVYN PLLNEILASH PELTLHTVQE SFTCFHYTDK LDRFPTVTFQ FDKSVSLAVY PREYLFQVRE DTWCFGWQNG
401: GLQTKGGASL TILGDMALSN KLVVYDIENQ VIGWTNHNCS GGIQVKDEES GAIYTVGAHN LSWSSSLAIT KLLTLVSLLI PFFCNVAL
101: QVDTGSDILW VNCAGCIRCP RKSDLVELTP YDVDASSTAK SVSCSDNFCS YVNQRSECHS GSTCQYVIMY GDGSSTNGYL VKDVVHLDLV TGNRQTGSTN
201: GTIIFGCGSK QSGQLGESQA AVDGIMGFGQ SNSSFISQLA SQGKVKRSFA HCLDNNNGGG IFAIGEVVSP KVKTTPMLSK SAHYSVNLNA IEVGNSVLEL
301: SSNAFDSGDD KGVIIDSGTT LVYLPDAVYN PLLNEILASH PELTLHTVQE SFTCFHYTDK LDRFPTVTFQ FDKSVSLAVY PREYLFQVRE DTWCFGWQNG
401: GLQTKGGASL TILGDMALSN KLVVYDIENQ VIGWTNHNCS GGIQVKDEES GAIYTVGAHN LSWSSSLAIT KLLTLVSLLI PFFCNVAL
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9M8R6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.