Factsheet for VIT_06s0061g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
plastid 2
vacuole 2
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26553	Soybean	extracellular, plasma membrane, vacuole	73.55	72.21
KRH22758	Soybean	extracellular, plasma membrane, vacuole	72.93	72.04
PGSC0003DMT400001138	Potato	plasma membrane	72.31	70.28
KRH30533	Soybean	extracellular	70.66	69.94
Solyc11g066620.1.1	Tomato	extracellular	71.69	69.54
KRH25141	Soybean	extracellular, plasma membrane, vacuole	71.07	69.49
Bra020219.1-P	Field mustard	extracellular	70.25	69.39
AT5G22850.1	Thale cress	plasma membrane	70.04	68.76
Bra002434.1-P	Field mustard	vacuole	69.63	68.64
CDX92331	Canola	extracellular, plasma membrane, vacuole	69.63	68.64
CDY26962	Canola	vacuole	69.21	68.23
CDY09172	Canola	extracellular, golgi	56.61	67.82
VIT_08s0007g04390.t01	Wine grape	extracellular, plasma membrane, vacuole	68.39	65.94
CDY71029	Canola	cytosol, plastid, vacuole	21.28	62.05
GSMUA_Achr8P15150_001	Banana	extracellular, plasma membrane, vacuole	63.64	60.39
GSMUA_Achr6P29770_001	Banana	extracellular, plasma membrane, vacuole	62.4	60.28
Zm00001d012633_P001	Maize	extracellular, plasma membrane, vacuole	62.81	59.73
GSMUA_Achr2P17680_001	Banana	vacuole	61.36	59.52
KXG33497	Sorghum	vacuole	61.98	59.29
TraesCS3D01G311700.2	Wheat	plasma membrane	58.47	56.6
TraesCS3A01G319800.1	Wheat	plasma membrane	58.47	56.37
TraesCS3B01G346500.2	Wheat	plasma membrane	58.26	55.51
HORVU3Hr1G076190.6	Barley	mitochondrion	53.51	51.9
TraesCS7B01G382700.1	Wheat	vacuole	46.07	47.35
TraesCS7A01G480600.1	Wheat	extracellular, plasma membrane, vacuole	45.25	46.5
TraesCS5D01G532900.3	Wheat	extracellular	27.48	46.34
HORVU7Hr1G108870.2	Barley	plasma membrane	45.25	46.2
TraesCS5D01G533000.1	Wheat	plastid	40.29	42.67
TraesCS4D01G072000.1	Wheat	cytosol, mitochondrion, plastid, vacuole	35.33	40.05
TraesCS3B01G145900.1	Wheat	plastid	35.33	38.69
TraesCS3B01G145600.1	Wheat	cytosol, peroxisome, plastid, vacuole	35.33	38.69
HORVU3Hr1G023700.2	Barley	plasma membrane	38.02	38.41
VIT_04s0023g00730.t01	Wine grape	plasma membrane, vacuole	37.81	38.12
HORVU5Hr1G120740.15	Barley	plastid	39.67	37.14
VIT_05s0062g01370.t01	Wine grape	plasma membrane, vacuole	35.95	34.66
TraesCS4A01G241700.1	Wheat	plastid	35.33	33.14
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	24.17	24.74
VIT_18s0001g02420.t01	Wine grape	vacuole	21.07	24.46
VIT_07s0031g02620.t01	Wine grape	extracellular, plasma membrane	21.28	24.18
VIT_07s0129g00600.t01	Wine grape	extracellular	29.13	22.27
VIT_18s0001g04790.t01	Wine grape	plasma membrane, plastid, vacuole	23.55	21.88
VIT_00s0434g00080.t01	Wine grape	plasma membrane, vacuole	22.93	21.43
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	22.93	20.94
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	13.22	20.91
VIT_18s0001g09470.t01	Wine grape	plasma membrane, vacuole	27.07	19.88

Protein Annotations

EntrezGene:100255070	wikigene:100255070	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A56	InterPro:Aspartic_peptidase_A1
ProteinID:CBI17107	ProteinID:CBI17107.3	UniProt:D7SN78	EMBL:FN594957	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100255070
wikigene:LOC100255070	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF527	InterPro:Pepsin-like_plant	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0001BE0EB7	ArrayExpress:VIT_06s0061g01030	EnsemblPlantsGene:VIT_06s0061g01030	EnsemblPlants:VIT_06s0061g01030.t01	unigene:Vvi.10704
RefSeq:XP_002272121	RefSeq:XP_002272121.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:18652826..18658516

Molecular Weight (calculated)

51686.1 Da

IEP (calculated)

4.608

GRAVY (calculated)

0.086

Length

484 amino acids

Sequence
(BLAST)

001: MFWPPPAVAS GFPATLTLER AFPLNQRVEL DELKARDRVR HGRFLQSSVG VVDFPVEGTY DPYRVGLYFT RVLLGSPPKE FYVQIDTGSD VLWVSCGSCN
101: GCPQSSGLHI PLNFFDPGSS STASLISCSD QRCSLGVQSS DAGCSSQGNQ CIYTFQYGDG SGTSGYYVSD LLNFDAIVGS SVTNSSASIV FGCSISQTGD
201: LTKSDRAVDG IFGFGQQDMS VISQMSSQGI TPKVFSHCLK GDGGGGGILV LGEIVEEDIV YSPLVPSQPH YNLNLQSISV NGKSLAIDPE VFATSTNRGT
301: IVDSGTTLAY LAEEAYDPFV SAITEAVSQS VRPLLSKGTQ CYLITSSVKG IFPTVSLNFA GGVSMNLKPE DYLLQQNSIG DAAVWCIGFQ KIQGQGITIL
401: GDLVLKDKIF VYDLAGQRIG WANYDCSMSV NVSTRSSTGK SEFVNAGQLS ESSSPRTVFY NKLIPGSIVA LLVHLSVLYT SLFL

Best Arabidopsis Sequence Match ( AT5G22850.1 )
(BLAST)

001: MAAIRFAAAI LICCLLPAAV LSYGFPAALK LERVIPANHE MELSQLKARD EARHGRLLQS LGGVIDFPVD GTFDPFVVGL YYTKLRLGTP PRDFYVQVDT
101: GSDVLWVSCA SCNGCPQTSG LQIQLNFFDP GSSVTASPIS CSDQRCSWGI QSSDSGCSVQ NNLCAYTFQY GDGSGTSGFY VSDVLQFDMI VGSSLVPNST
201: APVVFGCSTS QTGDLVKSDR AVDGIFGFGQ QGMSVISQLA SQGIAPRVFS HCLKGENGGG GILVLGEIVE PNMVFTPLVP SQPHYNVNLL SISVNGQALP
301: INPSVFSTSN GQGTIIDTGT TLAYLSEAAY VPFVEAITNA VSQSVRPVVS KGNQCYVITT SVGDIFPPVS LNFAGGASMF LNPQDYLIQQ NNVGGTAVWC
401: IGFQRIQNQG ITILGDLVLK DKIFVYDLVG QRIGWANYDC STSVNVSATS SSGRSEYVNA GQFSENAAAP QKLSLDIVGN TLMLLLMVIN MFL

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q0WRU5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.