Factsheet for VIT_18s0001g04790.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:

nucleus 1
vacuole 3
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
golgi 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	60.84	59.81
PGSC0003DMT400056847	Potato	vacuole	45.3	57.84
Solyc04g072690.2.1	Tomato	plasma membrane	55.47	54.73
KRH18849	Soybean	plasma membrane, vacuole	55.47	54.63
KRH16653	Soybean	plasma membrane	54.32	53.6
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	54.13	53.11
GSMUA_Achr5P22890_001	Banana	endoplasmic reticulum, plasma membrane	52.59	52.79
Os02t0751100-01	Rice	plasma membrane	50.48	50.58
TraesCS6D01G282400.2	Wheat	plasma membrane	48.94	49.71
Zm00001d018074_P001	Maize	vacuole	49.33	49.52
TraesCS6B01G332100.2	Wheat	plasma membrane	48.75	49.32
TraesCS6A01G302800.2	Wheat	plasma membrane	48.56	49.22
KXG30744	Sorghum	extracellular, vacuole	48.37	48.55
HORVU6Hr1G075110.2	Barley	plastid	47.98	44.96
Zm00001d052237_P001	Maize	plastid	47.02	37.81
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	20.15	34.31
VIT_00s0434g00080.t01	Wine grape	plasma membrane, vacuole	33.78	33.98
VIT_04s0023g00730.t01	Wine grape	plasma membrane, vacuole	21.88	23.75
VIT_06s0061g01030.t01	Wine grape	vacuole	21.88	23.55
VIT_05s0062g01370.t01	Wine grape	plasma membrane, vacuole	22.07	22.91
VIT_18s0001g02420.t01	Wine grape	vacuole	16.89	21.1
VIT_08s0007g04390.t01	Wine grape	extracellular, plasma membrane, vacuole	20.15	20.92
VIT_07s0031g02620.t01	Wine grape	extracellular, plasma membrane	17.08	20.89
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	18.81	20.72
VIT_07s0129g00600.t01	Wine grape	extracellular	20.92	17.22
VIT_18s0001g09470.t01	Wine grape	plasma membrane, vacuole	20.92	16.54

Protein Annotations

EntrezGene:100253991	wikigene:100253991	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A55	InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_AS	ProteinID:CBI19115	ProteinID:CBI19115.3	UniProt:E0CRG1	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100253991	wikigene:LOC100253991	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF339	InterPro:Pepsin-like_dom	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N
TMHMM:TMhelix	UniParc:UPI0001BE1439	ArrayExpress:VIT_18s0001g04790	EnsemblPlantsGene:VIT_18s0001g04790	EnsemblPlants:VIT_18s0001g04790.t01	unigene:Vvi.25863
RefSeq:XP_002284255	RefSeq:XP_002284255.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:+:3994178..4000375

Molecular Weight (calculated)

57593.7 Da

IEP (calculated)

5.450

GRAVY (calculated)

-0.008

Length

521 amino acids

Sequence
(BLAST)

001: MAYLLVVDAA IAVTFSSKLI HRFSDEAKAF FVSRNGNIFA DSWPKKRSFD YYRLLLSSDL KRQKLKLGAE YQLLFPSEGS DALFLGNEFG WLHYTWIDIG
101: TPNVSFLVAL DAGSDLLWVP CDCMQCAPLS ASYYDRLGRD LNEYSPSLSS TSKPLSCNDQ LCELGSDCKS SKDPCPYLAS YYSENTSSSG LLIEDRLHLA
201: PFSEHASRSS VWASVIIGCG RKQSGAFSDG AAPDGLMGLG PGDLSVPSLL AKAGLVRNTF SICFDDNHSG TILFGDQGLV TQKSTSFVPL EGKFVTYLIE
301: VEGYLVGSSS LKTAGFQALV DSGTSFTFLP YEIYEKIVVE FDKQVNATRS SFKGSPWKYC YNSSSQELLN IPTVTLVFAM NQSFIVHNPV IKLISENEEF
401: NVFCLPIQPI HEEFGIIGQN FMWGYRMVFD RENLKLGWST SNCQDITDGK IMHLTPPPND RSPNPLPTNQ QQMTPSRHAV APAVAGRTPA KSAAVSPLAF
501: PYWLCLMNLL LVLMRLFVLD V

Best Arabidopsis Sequence Match ( AT5G10080.1 )
(BLAST)

001: MVSRSAFLLF CVLFLATEET LASLFSSRLI HRFSDEGRAS IKTPSSSDSL PNKQSLEYYR LLAESDFRRQ RMNLGAKVQS LVPSEGSKTI SSGNDFGWLH
101: YTWIDIGTPS VSFLVALDTG SNLLWIPCNC VQCAPLTSTY YSSLATKDLN EYNPSSSSTS KVFLCSHKLC DSASDCESPK EQCPYTVNYL SGNTSSSGLL
201: VEDILHLTYN TNNRLMNGSS SVKARVVIGC GKKQSGDYLD GVAPDGLMGL GPAEISVPSF LSKAGLMRNS FSLCFDEEDS GRIYFGDMGP SIQQSTPFLQ
301: LDNNKYSGYI VGVEACCIGN SCLKQTSFTT FIDSGQSFTY LPEEIYRKVA LEIDRHINAT SKNFEGVSWE YCYESSAEPK VPAIKLKFSH NNTFVIHKPL
401: FVFQQSQGLV QFCLPISPSG QEGIGSIGQN YMRGYRMVFD RENMKLGWSP SKCQEDKIEP PQASPGSTSS PNPLPTDEQQ SRGGHAVSPA IAGKTPSKTP
501: SSSSSYSFSS IMRLFNSLLL LHWLASLM

Arabidopsis Description

Aspartic proteinase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX20]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.