Factsheet for VIT_18s0001g09470.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07210_001	Banana	cytosol, plastid, vacuole	59.18	69.64
GSMUA_Achr3P18830_001	Banana	cytosol	57.06	65.73
Os07t0592200-02	Rice	plasma membrane	60.55	63.23
EER99637	Sorghum	plasma membrane	60.55	63.13
TraesCS2A01G195800.1	Wheat	plasma membrane	59.79	62.34
AT5G43100.1	Thale cress	plasma membrane	59.64	62.28
TraesCS2B01G210700.2	Wheat	plasma membrane	59.64	62.18
TraesCS2D01G192000.1	Wheat	plasma membrane, plastid, vacuole	59.64	62.18
HORVU2Hr1G034720.3	Barley	vacuole	59.33	61.97
Zm00001d022010_P004	Maize	plasma membrane, plastid	59.33	61.87
VIT_07s0129g00600.t01	Wine grape	extracellular	59.18	61.61
CDY22367	Canola	plasma membrane	60.24	61.17
GSMUA_Achr4P14240_001	Banana	cytosol, peroxisome, plastid	52.05	61.03
CDX71501	Canola	plasma membrane	59.94	60.96
Bra033660.1-P	Field mustard	plasma membrane	59.94	60.68
Zm00001d006751_P001	Maize	vacuole	56.75	53.97
VIT_04s0023g00730.t01	Wine grape	plasma membrane, vacuole	20.64	28.33
VIT_05s0062g01370.t01	Wine grape	plasma membrane, vacuole	20.79	27.29
VIT_06s0061g01030.t01	Wine grape	vacuole	19.88	27.07
VIT_18s0001g02420.t01	Wine grape	vacuole	16.54	26.14
VIT_07s0031g02620.t01	Wine grape	extracellular, plasma membrane	16.24	25.12
VIT_08s0007g04390.t01	Wine grape	extracellular, plasma membrane, vacuole	18.82	24.7
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	16.69	23.26
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	10.47	22.55
VIT_18s0001g04790.t01	Wine grape	plasma membrane, plastid, vacuole	16.54	20.92
VIT_07s0031g01170.t01	Wine grape	extracellular, plasma membrane, vacuole	16.39	20.38
VIT_00s0434g00080.t01	Wine grape	plasma membrane, vacuole	15.63	19.88

Protein Annotations

EntrezGene:100245410	wikigene:100245410	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A59	InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_AS	ProteinID:CBI19435	ProteinID:CBI19435.3	UniProt:E0CP57	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100245410	wikigene:LOC100245410	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF520	InterPro:Pepsin-like_plant	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI000198533F	ArrayExpress:VIT_18s0001g09470	EnsemblPlantsGene:VIT_18s0001g09470	EnsemblPlants:VIT_18s0001g09470.t01
unigene:Vvi.8666	RefSeq:XP_002283258	RefSeq:XP_002283258.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:-:7918126..7925289

Molecular Weight (calculated)

73661.7 Da

IEP (calculated)

6.993

GRAVY (calculated)

-0.215

Length

659 amino acids

Sequence
(BLAST)

001: MTQTWSLLIS AIVILSFVTI YSSSASQIPN RGVRRPMIFP LYFASPKSSG HRQAIEGSYW RRHLKSDPYH HPNARMRLYD DLLSNGYYTT RLWIGTPPQE
101: FALIVDTGST VTYVPCSDCE HCGKHQDPRF QPDESSTYHP VKCNMDCNCD HDGVNCVYER RYAEMSSSSG VLGEDIISFG NQSEVVPQRA VFGCENVETG
201: DLYSQRADGI MGLGRGQLSI VDQLVDKNVI NDSFSLCYGG MHVGGGAMVL GGIPPPPDMV FSRSDPYRSP YYNIELKEIH VAGKPLKLSP STFDRKHGTV
301: LDSGTTYAYL PEEAFVAFRD AIIKKSHNLK QIHGPDPNYN DICFSGAGRD VSQLSKAFPE VDMVFSNGQK LSLTPENYLF QHTKVHGAYC LGIFRNGDST
401: TLLGGIIVRN TLVTYDRENE KIGFWKTNCS ELWKRLHIPG APAAAPIVPT PKSVSAPAPV VSYNNNTTVG MPPTVAPSGL PQEVLPGEFQ VGLITFDMSF
501: SVNYSNMKPN FTELAEFIAH ELEINASQVH FLNFFSKGNH SVIRWAIFPA ESATYISNST AMSIILQLKE HRVHLPERFG SYQLVEWKVE PQIKRTWWEQ
601: HFWTVVVGVI ITLILGLSTF GVWFVWKWRQ NAVGTYKPIG ARVPEQELQQ LTLISSSQA

Best Arabidopsis Sequence Match ( AT5G43100.1 )
(BLAST)

001: MDRSSLLLLL FTTTTISIFF FDLTTADESP MIFPLSYSSL PPRPRVEDFR RRRLHQSQLP NAHMKLYDDL LSNGYYTTRL WIGTPPQEFA LIVDTGSTVT
101: YVPCSTCKQC GKHQDPKFQP ELSTSYQALK CNPDCNCDDE GKLCVYERRY AEMSSSSGVL SEDLISFGNE SQLSPQRAVF GCENEETGDL FSQRADGIMG
201: LGRGKLSVVD QLVDKGVIED VFSLCYGGME VGGGAMVLGK ISPPPGMVFS HSDPFRSPYY NIDLKQMHVA GKSLKLNPKV FNGKHGTVLD SGTTYAYFPK
301: EAFIAIKDAV IKEIPSLKRI HGPDPNYDDV CFSGAGRDVA EIHNFFPEIA MEFGNGQKLI LSPENYLFRH TKVRGAYCLG IFPDRDSTTL LGGIVVRNTL
401: VTYDRENDKL GFLKTNCSDI WRRLAAPESP APTSPISQNK SSNISPSPAT SESPTSHLPG VFRVGVITFE VSISVNNSSL KPKFSEIADF IAHELDIQSA
501: QVRLLNFSSS GNEYRLKWGV FPPQSSEYIS NTTALNIMLL LKENRLRLPG QFGSYKLLEW KAEQKKKQSW WEKHLLGVVG GAMISLLVTS VMIKLALVWR
601: RRKQEEATYE PVNAAIKEQE LQPLSSETSN A

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:F4K4L3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.