Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400060025 Potato endoplasmic reticulum, extracellular, vacuole 94.55 94.55
Solyc04g056590.2.1 Tomato golgi, plasma membrane, vacuole 69.81 68.94
KRG92565 Soybean cytosol 34.59 57.29
Solyc03g058400.2.1 Tomato vacuole 57.02 56.9
VIT_04s0023g00730.t01 Wine grape plasma membrane, vacuole 55.77 55.42
KRH34227 Soybean plasma membrane 53.88 54.11
GSMUA_Achr6P27900_001 Banana golgi, vacuole 54.72 53.93
GSMUA_Achr3P17250_001 Banana plasma membrane, vacuole 53.04 52.16
Os04t0337000-01 Rice mitochondrion 34.8 51.71
Bra035522.1-P Field mustard vacuole 45.91 51.05
AT3G02740.1 Thale cress vacuole 51.36 50.2
CDY28705 Canola vacuole 51.36 50.0
CDY51538 Canola vacuole 51.15 49.9
Bra040597.1-P Field mustard vacuole 51.15 49.9
KRH00937 Soybean plasma membrane 50.1 49.69
Os02t0473200-01 Rice plasma membrane 51.36 49.6
CDY41753 Canola golgi, plasma membrane, vacuole 50.1 49.59
EES03170 Sorghum plasma membrane, vacuole 50.52 49.28
OQU84933 Sorghum extracellular, vacuole 50.52 49.18
TraesCS7B01G297200.2 Wheat plasma membrane, vacuole 50.94 48.99
CDY63001 Canola endoplasmic reticulum, plasma membrane, vacuole 49.48 48.86
TraesCS7A01G395300.1 Wheat vacuole 50.1 48.78
CDY37650 Canola extracellular, golgi 49.27 48.65
Bra035359.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 49.27 48.65
TraesCS7D01G390900.1 Wheat vacuole 49.9 48.57
CDY53740 Canola vacuole 41.09 48.4
TraesCS2D01G273200.1 Wheat extracellular, plasma membrane, vacuole 49.27 48.16
TraesCS2A01G275000.1 Wheat extracellular, plasma membrane, vacuole 49.06 47.95
EES14146 Sorghum plasma membrane 49.48 47.87
CDY51094 Canola extracellular, vacuole 46.75 47.85
TraesCS2B01G291900.1 Wheat extracellular, plasma membrane, vacuole 48.85 47.75
KRH40286 Soybean golgi, plasma membrane, vacuole 49.48 47.58
CDY68869 Canola extracellular, vacuole 43.4 47.48
AT5G36260.1 Thale cress extracellular, plasma membrane, vacuole 47.8 47.3
Solyc05g053900.2.1 Tomato golgi, vacuole 46.96 46.86
Zm00001d050521_P001 Maize vacuole 49.27 46.72
CDY38557 Canola cytosol, plastid 26.62 46.69
Zm00001d016477_P004 Maize vacuole 50.31 46.33
Solyc09g098340.2.1 Tomato extracellular 46.54 45.96
CDY55968 Canola plasma membrane 45.28 45.76
Zm00001d052720_P002 Maize plasma membrane 48.64 45.67
CDY12353 Canola plasma membrane 45.07 45.55
Bra040466.1-P Field mustard plasma membrane 44.86 45.34
Zm00001d044304_P002 Maize plasma membrane, vacuole 50.31 44.69
AT1G65240.1 Thale cress golgi, plasma membrane, vacuole 44.44 44.63
Bra021415.1-P Field mustard vacuole 36.9 44.22
Zm00001d016476_P001 Maize vacuole 46.33 44.02
Bra039497.1-P Field mustard extracellular, vacuole 45.28 43.99
HORVU2Hr1G066860.8 Barley vacuole 46.96 43.58
Os04t0334951-01 Rice extracellular 37.95 41.8
Os04t0334700-01 Rice extracellular 38.36 37.97
Os04t0336600-00 Rice extracellular 38.36 37.97
Solyc01g011220.1.1 Tomato cytosol 16.56 35.91
Solyc01g011300.1.1 Tomato cytosol 8.39 33.9
Solyc11g066620.1.1 Tomato extracellular 34.8 33.27
Solyc01g011330.1.1 Tomato plastid 12.37 32.96
Solyc09g008600.2.1 Tomato extracellular, plasma membrane, vacuole 33.96 32.4
Solyc10g085760.1.1 Tomato cytosol, mitochondrion, plastid 16.77 30.08
Solyc06g018100.2.1 Tomato extracellular, plasma membrane 22.43 25.06
Solyc06g009110.2.1 Tomato extracellular 21.17 24.05
Solyc06g009080.1.1 Tomato cytosol 5.24 22.73
Solyc06g009090.1.1 Tomato extracellular, vacuole 9.85 22.17
Solyc06g060130.2.1 Tomato extracellular 20.34 22.0
Solyc02g083450.2.1 Tomato vacuole 22.43 20.54
Solyc02g083460.2.1 Tomato extracellular 22.85 20.22
Solyc04g054490.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 22.43 19.93
Solyc04g072690.2.1 Tomato plasma membrane 22.01 19.89
Solyc01g098710.2.1 Tomato plasma membrane, vacuole 26.0 19.05
Solyc03g033360.1.1 Tomato plastid 15.3 18.77
Solyc08g029230.2.1 Tomato plasma membrane 25.16 18.24
Solyc10g044740.1.1 Tomato plastid 24.32 18.18
Solyc06g069190.2.1 Tomato cytosol, nucleus, vacuole 20.75 17.62
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10MEROPS:A01.A34InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056
GO:GO:0016787GO:GO:0019538GO:GO:0030163InterPro:IPR021109InterPro:IPR033121UniProt:K4C2Q5
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792PFscan:PS51767PANTHER:PTHR13683
PANTHER:PTHR13683:SF288InterPro:Pepsin-like_plantInterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTMEnsemblPlantsGene:Solyc05g055800.2
EnsemblPlants:Solyc05g055800.2.1InterPro:TAXi_CInterPro:TAXi_NUniParc:UPI0002767259SEG:seg:
Description
No Description!
Coordinates
chr5:-:65295231..65302365
Molecular Weight (calculated)
52116.1 Da
IEP (calculated)
5.024
GRAVY (calculated)
-0.062
Length
477 amino acids
Sequence
(BLAST)
001: MGDLINGCLI LLLILMGYGV DVKGENLVFD VKHKYGGRNG NGSILNDLKA HDNRRHSRML TVIDFKLGGN GLPTDAALYY TKISIGNPSR DFHVQVDTGS
101: EILWVNCASC EGCPTKSDLG IDLMKYDPKA SVTGKSVSCD EEFCLLNTPY SDCRTGMPCD FQVSYGDGSS TAGFFVKDDI QFEQVSGDLQ TTLMNGSISF
201: GCSSRQSGEL GASNQAVDGI LGFGQASSSV ISQLAASGKV KKIFAHCLNG KNGGGIFTIG PVVNPKVNTT PLVPDAPHYS VIMKGIEVDG QVLDIPTTMA
301: IIDSGTTLAY LPHKVYSTLM DKLIERHPQL NIRLVEQSFH CFDYTGKIDD GFPVVNFRFA DSLPLTVYPH DYLFQIEENR WCIGWQDSKM QTKDGSEITL
401: LGDLVLSNKL VVYDIENQAI GWTEYDCSST IKLKYEESSG SAYTVASHNI SSASMMDSTK FFTSFLITIS ILFNLFK
Best Arabidopsis Sequence Match ( AT1G05840.1 )
(BLAST)
001: MTLSIVSFPI CGRFTLIWFL TALVSVSCNP GVFNVKYRYP RLQGSLTALK EHDDRRQLTI LAGIDLPLGG TGRPDIPGLY YAKIGIGTPA KSYYVQVDTG
101: SDIMWVNCIQ CKQCPRRSTL GIELTLYNID ESDSGKLVSC DDDFCYQISG GPLSGCKANM SCPYLEIYGD GSSTAGYFVK DVVQYDSVAG DLKTQTANGS
201: VIFGCGARQS GDLDSSNEEA LDGILGFGKA NSSMISQLAS SGRVKKIFAH CLDGRNGGGI FAIGRVVQPK VNMTPLVPNQ PHYNVNMTAV QVGQEFLTIP
301: ADLFQPGDRK GAIIDSGTTL AYLPEIIYEP LVKKITSQEP ALKVHIVDKD YKCFQYSGRV DEGFPNVTFH FENSVFLRVY PHDYLFPHEG MWCIGWQNSA
401: MQSRDRRNMT LLGDLVLSNK LVLYDLENQL IGWTEYNCSS SIKVKDEGTG TVHLVGSHFI SSALPLDTSM CLLFSLLLLM TLFLL
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:F4IAD5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.