Factsheet for Solyc03g033360.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g066170.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17760.1	Solyc07g066170.2.1	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058018	Potato	vacuole	93.57	66.54
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	41.13	52.29
Solyc02g083460.2.1	Tomato	extracellular	69.92	50.46
GSMUA_Achr1P07410_001	Banana	cytosol	16.2	45.0
KRH76603	Soybean	vacuole	49.1	37.6
KRH28845	Soybean	vacuole	48.59	37.2
AT2G17760.1	Thale cress	golgi, plasma membrane, vacuole	48.07	36.45
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	46.79	36.18
GSMUA_Achr4P05070_001	Banana	plasma membrane, vacuole	41.65	36.16
CDY24371	Canola	extracellular, plasma membrane, vacuole	46.79	35.55
Os09t0542100-01	Rice	plasma membrane	44.73	35.51
Bra024490.1-P	Field mustard	vacuole	46.53	35.42
CDY07819	Canola	vacuole	46.53	35.42
CDY29199	Canola	vacuole	46.53	35.42
KRH07991	Soybean	nucleus	46.53	35.08
EER99278	Sorghum	extracellular, plasma membrane, vacuole	45.24	33.65
GSMUA_Achr1P07390_001	Banana	extracellular, vacuole	44.47	33.59
GSMUA_Achr2P03530_001	Banana	plasma membrane	44.99	33.59
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	38.56	33.41
Solyc02g083450.2.1	Tomato	vacuole	44.73	33.4
TraesCS2D01G065800.1	Wheat	vacuole	43.7	33.33
Zm00001d022600_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	43.7	33.33
KXG25917	Sorghum	vacuole	43.96	33.08
TraesCS5B01G334700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.7	32.95
TraesCS5A01G335500.1	Wheat	extracellular, plasma membrane, vacuole	43.96	32.88
TraesCS2B01G079700.1	Wheat	vacuole	43.44	32.88
GSMUA_Achr7P03880_001	Banana	extracellular	37.02	32.73
TraesCS5D01G340300.1	Wheat	extracellular, plasma membrane, vacuole	43.44	32.5
Zm00001d004132_P001	Maize	extracellular	43.19	32.43
TraesCS2A01G067500.1	Wheat	vacuole	42.42	32.16
GSMUA_AchrUn_...	Banana	vacuole	41.9	31.65
EER88970	Sorghum	vacuole	43.44	31.24
Os04t0228000-01	Rice	extracellular, vacuole	42.16	30.94
HORVU7Hr1G118020.3	Barley	extracellular, plasma membrane, vacuole	42.67	30.91
TraesCS7D01G524300.1	Wheat	plastid	41.39	30.73
Zm00001d014804_P001	Maize	extracellular	42.67	30.57
HORVU5Hr1G084490.1	Barley	vacuole	43.19	30.32
TraesCS7A01G537200.1	Wheat	plasma membrane	41.65	30.28
CDX73727	Canola	vacuole	38.3	30.22
KRH69733	Soybean	nucleus	46.53	30.07
Bra036814.1-P	Field mustard	vacuole	37.28	30.02
CDY20815	Canola	plasma membrane, plastid, vacuole	46.53	30.02
Os06t0717900-02	Rice	extracellular	42.42	29.95
CDX78000	Canola	vacuole	37.28	28.77
AT3G51330.1	Thale cress	extracellular, plasma membrane, vacuole	39.07	28.73
CDX73728	Canola	vacuole	39.33	28.44
EER89124	Sorghum	extracellular, vacuole	41.9	28.35
Bra036815.1-P	Field mustard	vacuole	39.33	28.23
CDX77999	Canola	vacuole	38.82	28.17
Zm00001d036037_P001	Maize	vacuole	41.65	28.12
GSMUA_Achr1P07400_001	Banana	cytosol, plasma membrane, plastid	11.57	28.12
AT3G51360.9	Thale cress	vacuole	35.73	27.91
CDX90651	Canola	plasma membrane	38.3	27.9
CDY29013	Canola	plasma membrane	38.05	27.72
Solyc04g054490.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	38.05	27.56
Bra013063.1-P	Field mustard	plasma membrane	20.05	26.9
AT3G51340.1	Thale cress	plasma membrane	35.99	26.42
Solyc01g011220.1.1	Tomato	cytosol	14.91	26.36
AT3G51350.1	Thale cress	extracellular, plasma membrane, vacuole	35.73	26.33
Solyc01g011300.1.1	Tomato	cytosol	7.71	25.42
CDY02252	Canola	golgi, plasma membrane, vacuole	20.05	25.0
Solyc04g072690.2.1	Tomato	plasma membrane	33.16	24.43
Bra012857.1-P	Field mustard	plasma membrane	28.02	24.17
Solyc01g011330.1.1	Tomato	plastid	10.28	22.35
Solyc06g009080.1.1	Tomato	cytosol	6.17	21.82
Solyc10g085760.1.1	Tomato	cytosol, mitochondrion, plastid	12.6	18.42
Solyc06g018100.2.1	Tomato	extracellular, plasma membrane	19.79	18.03
Solyc06g009110.2.1	Tomato	extracellular	18.77	17.38
Solyc06g060130.2.1	Tomato	extracellular	19.28	17.01
Solyc09g008600.2.1	Tomato	extracellular, plasma membrane, vacuole	20.82	16.2
Solyc11g066620.1.1	Tomato	extracellular	20.57	16.03
Solyc03g058400.2.1	Tomato	vacuole	19.54	15.9
Solyc04g056590.2.1	Tomato	golgi, plasma membrane, vacuole	19.54	15.73
Solyc05g055800.2.1	Tomato	extracellular, vacuole	18.77	15.3
Solyc06g009090.1.1	Tomato	extracellular, vacuole	8.23	15.09
Solyc05g053900.2.1	Tomato	golgi, vacuole	18.51	15.06
Solyc09g098340.2.1	Tomato	extracellular	18.25	14.7
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	19.02	13.17
Solyc08g029230.2.1	Tomato	plasma membrane	21.85	12.92
Solyc01g098710.2.1	Tomato	plasma membrane, vacuole	21.08	12.6
Solyc10g044740.1.1	Tomato	plastid	20.31	12.38

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	UniProt:K4BFK8
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF232	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	EnsemblPlantsGene:Solyc03g033360.1	EnsemblPlants:Solyc03g033360.1.1	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI00027679C4	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:+:4928775..4931811

Molecular Weight (calculated)

42353.1 Da

IEP (calculated)

5.132

GRAVY (calculated)

-0.109

Length

389 amino acids

Sequence
(BLAST)

001: MSFHKIPIDL NIYSPNTSST SKIVPCSGTL CAQGRQCSVA QSACAYRVAY LSHNTSSSGV LVEDILHLQT DSTQQKAVEA PITFGCGMKQ TGAFLNGAAP
101: NGLFGLSMGN ISVPSVLANK GLAANSFSLC FGADGIGRID FGDKGSLDQG ETPFNLEQTH QTYNISLTGI TVGNKNVDVD FTAIFDSGTS FTYLNDPAYK
201: VITENYNSQA QELRIQPMVQ VPFEYCYGLR ANQTNFQILD VNLMMKGGNQ FYLFDPIITL SLPDGSTAYC LAVVKSGDVN IIGQNFMTGY QVVFDREKMV
301: LGWKPSNCYD SKESKSRTTL PVNKQRPTEG SDPTSGLPED TRENGNDIIR STPDFTASTS AGNYVTKSLT FFCQLVVVLF FLYSHYLII

Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)

001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL

Arabidopsis Description

APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.