Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
EER96942
EES14314
OQU81760

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17760.1 EER96942 AT4G26455.1 21798944
AT2G17760.1 EES14314 AT4G26455.1 21798944
AT2G17760.1 OQU81760 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014804_P001 Maize extracellular 79.3 79.01
HORVU7Hr1G118020.3 Barley extracellular, plasma membrane, vacuole 61.0 61.45
TraesCS7D01G524300.1 Wheat plastid 59.52 61.45
TraesCS7A01G537200.1 Wheat plasma membrane 60.63 61.31
Os06t0717900-02 Rice extracellular 58.41 57.35
EER89124 Sorghum extracellular, vacuole 54.53 51.3
GSMUA_AchrUn_... Banana plasma membrane, vacuole 40.3 48.55
PGSC0003DMT400010765 Potato cytosol 15.71 45.7
GSMUA_Achr7P03880_001 Banana extracellular 37.15 45.68
EER99278 Sorghum extracellular, plasma membrane, vacuole 42.51 43.98
VIT_00s0510g00050.t01 Wine grape plasma membrane, vacuole 24.58 43.46
Solyc03g033360.1.1 Tomato plastid 31.24 43.44
Bra002086.1-P Field mustard extracellular, plasma membrane, vacuole 40.3 43.34
GSMUA_AchrUn_... Banana vacuole 41.22 43.3
CDY24371 Canola extracellular, plasma membrane, vacuole 40.48 42.77
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 40.48 42.69
KRH76603 Soybean vacuole 39.56 42.13
KRH28845 Soybean vacuole 39.37 41.93
KXG25917 Sorghum vacuole 39.93 41.78
Solyc02g083460.2.1 Tomato extracellular 41.59 41.74
PGSC0003DMT400009406 Potato plasma membrane, vacuole 41.22 41.37
CDY02252 Canola golgi, plasma membrane, vacuole 23.66 41.03
PGSC0003DMT400058018 Potato vacuole 41.4 40.95
Bra024490.1-P Field mustard vacuole 38.45 40.7
CDY29199 Canola vacuole 38.45 40.7
CDY07819 Canola vacuole 38.26 40.51
KRH07991 Soybean nucleus 38.45 40.31
Bra013063.1-P Field mustard plasma membrane 21.44 40.0
Bra036814.1-P Field mustard vacuole 34.38 38.51
AT3G51360.9 Thale cress vacuole 35.12 38.15
CDY29013 Canola plasma membrane 37.15 37.64
CDX73727 Canola vacuole 34.2 37.53
CDX90651 Canola plasma membrane 36.78 37.27
CDX78000 Canola vacuole 34.57 37.1
AT3G51330.1 Thale cress extracellular, plasma membrane, vacuole 36.23 37.05
CDY20815 Canola plasma membrane, plastid, vacuole 40.85 36.65
CDX73728 Canola vacuole 36.23 36.43
CDX77999 Canola vacuole 36.04 36.38
AT3G51350.1 Thale cress extracellular, plasma membrane, vacuole 35.49 36.36
Bra036815.1-P Field mustard vacuole 36.04 35.98
Bra012857.1-P Field mustard plasma membrane 29.76 35.7
KRH69733 Soybean nucleus 38.63 34.72
KXG30744 Sorghum extracellular, vacuole 32.53 33.91
AT3G51340.1 Thale cress plasma membrane 32.53 33.21
EES14146 Sorghum plasma membrane 22.74 24.95
EES09417 Sorghum plasma membrane, vacuole 18.3 23.86
EES03170 Sorghum plasma membrane, vacuole 21.44 23.72
OQU84933 Sorghum extracellular, vacuole 20.89 23.06
KXG33497 Sorghum vacuole 20.89 22.33
KXG23105 Sorghum plasma membrane, vacuole 18.11 21.4
EES09418 Sorghum endoplasmic reticulum, golgi, vacuole 15.9 21.08
EES08111 Sorghum vacuole 15.9 21.08
EES05585 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 19.04 18.49
KXG19766 Sorghum cytosol, plastid, vacuole 17.38 17.94
EER99637 Sorghum plasma membrane 20.33 17.41
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:8069202InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASUniProt:C5Z1X3
EnsemblPlants:EER88970ProteinID:EER88970ProteinID:EER88970.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787
GO:GO:0019538GO:GO:0030163InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541
PFAM:PF14543PRINTS:PR00792ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF232
InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3010G268400SUPFAM:SSF50630unigene:Sbi.20556SignalP:SignalP-noTMInterPro:TAXi_C
InterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0001A891C5RefSeq:XP_002437603.1SEG:seg:
Description
hypothetical protein
Coordinates
chr10:+:60307573..60310425
Molecular Weight (calculated)
56515.2 Da
IEP (calculated)
4.920
GRAVY (calculated)
0.002
Length
541 amino acids
Sequence
(BLAST)
001: MAQANSNHRC TGLLVAVAIV AVSFLVAAGD ASSVGFDLHH RFSPVVRQWA EARGHPFAAQ DWPARGSPEY YSALSRHDRA VLSRRALADG ADGLVTFAAG
101: NDTLQYIGSL YYAVVEVGTP NATFLVALDT GSDLFWVPCD CKQCASIANV TGQPATALRP YSPRESSTSK QVTCDNALCD RPNGCSAATN GSCPYEVQYL
201: SANTSTSGVL VQDVLHLTRE RPGAAAEAGE ALQAPVVFGC GQVQTGTFLD GAAFDGLMGL GRENVSVPSV LASSGLVASD SFSMCFGDDG VGRINFGDSG
301: SSGQGETPFT GRRTLYNVSF TAVNVETKSV AAEFAAVIDS GTSFTYLADP EYTELATNFN SLVRERRTNF SSGSADPFPF EYCYALGPNQ TEALIPDVSL
401: TTKGGARFPV TQPVIGVASG RTVVGYCLAI MKNDLGVNFN IIGQNFMTGL KVVFDREKSV LGWEKFDCYK NARVADAPDG SPSPAPAADP TKITPRQNDG
501: SSNGFPAAAP LPRSAGSRNA AASALGAGGL SLLMLVAATL V
Best Arabidopsis Sequence Match ( AT4G35880.1 )
(BLAST)
001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
Arabidopsis Description
AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.