Factsheet for AT2G17760.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 6
extracellular 5
vacuole 5
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	87.33	89.07
CDY24371	Canola	extracellular, plasma membrane, vacuole	88.89	89.06
Bra024490.1-P	Field mustard	vacuole	88.11	88.45
CDY29199	Canola	vacuole	88.11	88.45
CDY07819	Canola	vacuole	86.74	87.08
CDY20815	Canola	plasma membrane, plastid, vacuole	88.89	75.62
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	32.55	54.58
KRH28845	Soybean	vacuole	53.61	54.13
KRH76603	Soybean	vacuole	52.44	52.95
PGSC0003DMT400010765	Potato	cytosol	18.52	51.08
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	53.22	50.65
Solyc02g083460.2.1	Tomato	extracellular	52.83	50.28
KRH07991	Soybean	nucleus	50.1	49.81
GSMUA_Achr1P07410_001	Banana	cytosol	13.26	48.57
GSMUA_Achr4P05070_001	Banana	plasma membrane, vacuole	42.3	48.44
AT4G35880.1	Thale cress	plasma membrane	49.32	48.28
Solyc03g033360.1.1	Tomato	plastid	36.45	48.07
AT3G51330.1	Thale cress	extracellular, plasma membrane, vacuole	49.32	47.83
PGSC0003DMT400058018	Potato	vacuole	49.71	46.62
TraesCS2D01G065800.1	Wheat	vacuole	46.2	46.47
TraesCS2B01G079700.1	Wheat	vacuole	46.2	46.11
GSMUA_Achr2P03530_001	Banana	plasma membrane	46.59	45.87
TraesCS2A01G067500.1	Wheat	vacuole	45.42	45.42
Zm00001d022600_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	44.83	45.1
AT3G51360.9	Thale cress	vacuole	43.66	44.98
TraesCS5B01G334700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.22	44.96
KXG25917	Sorghum	vacuole	45.22	44.87
TraesCS5A01G335500.1	Wheat	extracellular, plasma membrane, vacuole	45.22	44.62
TraesCS5D01G340300.1	Wheat	extracellular, plasma membrane, vacuole	45.22	44.62
AT3G51350.1	Thale cress	extracellular, plasma membrane, vacuole	45.42	44.13
GSMUA_Achr1P07390_001	Banana	extracellular, vacuole	44.25	44.08
EER99278	Sorghum	extracellular, plasma membrane, vacuole	44.83	43.98
KRH69733	Soybean	nucleus	51.27	43.69
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	38.21	43.65
Zm00001d004132_P001	Maize	extracellular	44.05	43.63
Os04t0228000-01	Rice	extracellular, vacuole	45.03	43.58
Os09t0542100-01	Rice	plasma membrane	41.52	43.47
GSMUA_Achr1P07400_001	Banana	cytosol, plasma membrane, plastid	13.26	42.5
AT3G51340.1	Thale cress	plasma membrane	43.86	42.45
GSMUA_AchrUn_...	Banana	vacuole	42.3	42.14
HORVU5Hr1G084490.1	Barley	vacuole	45.03	41.7
GSMUA_Achr7P03880_001	Banana	extracellular	35.28	41.14
EER88970	Sorghum	vacuole	42.69	40.48
TraesCS7D01G524300.1	Wheat	plastid	41.33	40.46
HORVU7Hr1G118020.3	Barley	extracellular, plasma membrane, vacuole	41.91	40.04
TraesCS7A01G537200.1	Wheat	plasma membrane	41.72	40.0
Zm00001d014804_P001	Maize	extracellular	42.3	39.96
Os06t0717900-02	Rice	extracellular	41.72	38.84
EER89124	Sorghum	extracellular, vacuole	42.11	37.57
Zm00001d036037_P001	Maize	vacuole	41.72	37.15
AT5G10080.1	Thale cress	vacuole	33.92	32.95
AT5G22850.1	Thale cress	plasma membrane	23.39	24.34
AT4G33490.2	Thale cress	endoplasmic reticulum, golgi, vacuole	19.88	24.0
AT1G44130.1	Thale cress	vacuole	18.71	23.7
AT1G77480.1	Thale cress	golgi, plastid, vacuole	21.25	23.39
AT3G02740.1	Thale cress	vacuole	21.64	22.75
AT1G05840.1	Thale cress	plasma membrane	20.86	22.06
AT1G65240.1	Thale cress	golgi, plasma membrane, vacuole	20.27	21.89
AT5G36260.1	Thale cress	extracellular, plasma membrane, vacuole	20.27	21.58
AT2G36670.1	Thale cress	plasma membrane	21.44	21.48
AT1G08210.3	Thale cress	extracellular	21.44	20.37
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	20.66	18.18
AT3G50050.1	Thale cress	plasma membrane, vacuole	22.22	18.04
AT3G42550.1	Thale cress	vacuole	14.62	17.44
AT5G43100.1	Thale cress	plasma membrane	19.69	16.01

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EntrezGene:816285	MEROPS:A01.A38	ProteinID:AEC06679.1	ArrayExpress:AT2G17760
EnsemblPlantsGene:AT2G17760	RefSeq:AT2G17760	TAIR:AT2G17760	RefSeq:AT2G17760-TAIR-G	EnsemblPlants:AT2G17760.1	TAIR:AT2G17760.1
EMBL:AY069886	EMBL:AY142012	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	Unigene:At.25211	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0016020	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	GO:GO:0031225	InterPro:IPR021109	InterPro:IPR033121	RefSeq:NP_849967.1
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF232	InterPro:Peptidase_aspartic_dom_sf	UniProt:Q8VYV9	SUPFAM:SSF50630	SignalP:SignalP-noTM
InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI00000A1642	SEG:seg	:

Description

APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]

Coordinates

chr2:+:7713234..7716505

Molecular Weight (calculated)

56030.9 Da

IEP (calculated)

4.882

GRAVY (calculated)

-0.113

Length

513 amino acids

Sequence
(BLAST)

001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.