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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • plastid 4
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:plastid
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029989.1-P Field mustard plasma membrane 85.76 86.17
CDX83107 Canola plasma membrane 85.76 86.17
CDX68564 Canola plasma membrane, vacuole 85.6 85.87
Bra036047.1-P Field mustard plastid 83.54 84.48
CDY57356 Canola plasma membrane 84.34 84.34
CDY30609 Canola plasma membrane 83.23 84.16
GSMUA_Achr4P07210_001 Banana cytosol, plastid, vacuole 52.85 59.64
KRH04490 Soybean vacuole 59.49 59.31
GSMUA_Achr3P18830_001 Banana cytosol 53.01 58.57
KRH28412 Soybean plasma membrane 57.59 56.17
KRH77066 Soybean endoplasmic reticulum, plasma membrane 57.28 56.12
EER99637 Sorghum plasma membrane 56.01 56.01
TraesCS2A01G195800.1 Wheat plasma membrane 55.85 55.85
Os07t0592200-02 Rice plasma membrane 55.38 55.47
TraesCS2B01G210700.2 Wheat plasma membrane 55.38 55.38
TraesCS2D01G192000.1 Wheat plasma membrane, plastid, vacuole 55.38 55.38
Zm00001d022010_P004 Maize plasma membrane, plastid 55.22 55.22
HORVU2Hr1G034720.3 Barley vacuole 54.91 54.99
KRH58031 Soybean plastid 59.02 54.45
VIT_07s0129g00600.t01 Wine grape extracellular 53.01 52.92
Solyc01g098710.2.1 Tomato plasma membrane, vacuole 54.43 52.84
PGSC0003DMT400073638 Potato plasma membrane 54.59 52.67
AT5G43100.1 Thale cress plasma membrane 52.53 52.61
GSMUA_Achr4P14240_001 Banana cytosol, peroxisome, plastid 46.2 51.96
Zm00001d006751_P001 Maize vacuole 52.53 47.91
AT3G02740.1 Thale cress vacuole 21.04 27.25
AT5G22850.1 Thale cress plasma membrane 20.57 26.37
AT4G33490.2 Thale cress endoplasmic reticulum, golgi, vacuole 17.72 26.35
AT1G65240.1 Thale cress golgi, plasma membrane, vacuole 19.15 25.47
AT1G44130.1 Thale cress vacuole 16.3 25.43
AT2G36670.1 Thale cress plasma membrane 20.57 25.39
AT1G05840.1 Thale cress plasma membrane 19.3 25.15
AT5G36260.1 Thale cress extracellular, plasma membrane, vacuole 19.15 25.1
AT1G08210.3 Thale cress extracellular 21.36 25.0
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 18.04 22.22
AT1G77480.1 Thale cress golgi, plastid, vacuole 16.3 22.1
AT3G42550.1 Thale cress vacuole 15.03 22.09
AT3G51360.9 Thale cress vacuole 16.46 20.88
AT5G10080.1 Thale cress vacuole 17.09 20.45
AT1G49050.1 Thale cress cytosol, plastid, vacuole 18.04 19.55
AT3G51350.1 Thale cress extracellular, plasma membrane, vacuole 15.51 18.56
AT3G51330.1 Thale cress extracellular, plasma membrane, vacuole 15.19 18.15
AT4G35880.1 Thale cress plasma membrane 15.03 18.13
AT3G51340.1 Thale cress plasma membrane 13.13 15.66
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:824167MEROPS:A01.A42ProteinID:AEE78621.1ArrayExpress:AT3G50050
EnsemblPlantsGene:AT3G50050RefSeq:AT3G50050TAIR:AT3G50050RefSeq:AT3G50050-TAIR-GEnsemblPlants:AT3G50050.1TAIR:AT3G50050.1
InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASEMBL:BT015816EMBL:BT020205ProteinID:CAB62113.1GO:GO:0003674
GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0008233GO:GO:0009056GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538
GO:GO:0030163InterPro:IPR021109InterPro:IPR033121RefSeq:NP_190574.1InterPro:PEPTIDASE_A1PFAM:PF14541
PFAM:PF14543PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007115PO:PO:0007611PO:PO:0007616PO:PO:0009005PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020100PO:PO:0020137PO:PO:0025022PRINTS:PR00792ScanProsite:PS00141
PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF419InterPro:Pepsin-like_plantInterPro:Peptidase_aspartic_dom_sfUniProt:Q9SN13
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI00000A8C4E
SEG:seg:::::
Description
At3g50050 [Source:UniProtKB/TrEMBL;Acc:Q9SN13]
Coordinates
chr3:-:18553941..18557460
Molecular Weight (calculated)
69752.7 Da
IEP (calculated)
5.755
GRAVY (calculated)
-0.241
Length
632 amino acids
Sequence
(BLAST)
001: MALPSISSIG ATFSLLIYLS LPYSITAGEN NLLHQSPTAR SRRPMVFPLF LSQPNSSSRS ISIPHRKLHK SDSKSLPHSR MRLYDDLLIN GYYTTRLWIG
101: TPPQMFALIV DSGSTVTYVP CSDCEQCGKH QDPKFQPEMS STYQPVKCNM DCNCDDDREQ CVYEREYAEH SSSKGVLGED LISFGNESQL TPQRAVFGCE
201: TVETGDLYSQ RADGIIGLGQ GDLSLVDQLV DKGLISNSFG LCYGGMDVGG GSMILGGFDY PSDMVFTDSD PDRSPYYNID LTGIRVAGKQ LSLHSRVFDG
301: EHGAVLDSGT TYAYLPDAAF AAFEEAVMRE VSTLKQIDGP DPNFKDTCFQ VAASNYVSEL SKIFPSVEMV FKSGQSWLLS PENYMFRHSK VHGAYCLGVF
401: PNGKDHTTLL GGIVVRNTLV VYDRENSKVG FWRTNCSELS DRLHIDGAPP PATLPSNDSN PSHNSSSNLS GVTQVGQINL DIQLTVNSSY LKPRIEDLSK
501: IFSKELDVKS SQVSLSNLTS KGNESLVRMV VLPPEPSTWF SNVTATNIVS RFTNHQIKLP EIFGNYQLVN YKLEPPRKRT NNNIVVIAIG IIAVIVGLSA
601: YGAWLIWKRK QTSIPYKPVD EAIVAEQELQ PI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.