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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G08210.3 Thale cress extracellular 47.91 38.15
AT5G22850.1 Thale cress plasma membrane 40.7 35.5
AT2G36670.1 Thale cress plasma membrane 37.21 31.25
GSMUA_Achr8P15150_001 Banana extracellular, plasma membrane, vacuole 36.98 31.18
GSMUA_Achr6P29770_001 Banana extracellular, plasma membrane, vacuole 36.05 30.94
GSMUA_Achr2P17680_001 Banana vacuole 35.58 30.66
TraesCS3A01G319800.1 Wheat plasma membrane 34.65 29.68
TraesCS3D01G311700.2 Wheat plasma membrane 34.42 29.6
Zm00001d012633_P001 Maize extracellular, plasma membrane, vacuole 34.88 29.47
KXG33497 Sorghum vacuole 34.65 29.45
HORVU7Hr1G108870.2 Barley plasma membrane 32.33 29.32
TraesCS3B01G346500.2 Wheat plasma membrane 34.42 29.13
TraesCS7B01G382700.1 Wheat vacuole 31.4 28.66
TraesCS7A01G480600.1 Wheat extracellular, plasma membrane, vacuole 30.93 28.24
HORVU3Hr1G076190.6 Barley mitochondrion 32.33 27.86
TraesCS4D01G072000.1 Wheat cytosol, mitochondrion, plastid, vacuole 26.51 26.7
TraesCS5D01G533000.1 Wheat plastid 27.91 26.26
AT3G02740.1 Thale cress vacuole 28.6 25.2
AT1G05840.1 Thale cress plasma membrane 28.14 24.95
TraesCS3B01G145900.1 Wheat plastid 25.58 24.89
TraesCS3B01G145600.1 Wheat cytosol, peroxisome, plastid, vacuole 25.58 24.89
HORVU5Hr1G120740.15 Barley plastid 29.77 24.76
AT1G65240.1 Thale cress golgi, plasma membrane, vacuole 27.21 24.63
TraesCS5D01G532900.3 Wheat extracellular 16.28 24.39
AT5G36260.1 Thale cress extracellular, plasma membrane, vacuole 27.21 24.27
HORVU3Hr1G023700.2 Barley plasma membrane 26.98 24.22
TraesCS4A01G241700.1 Wheat plastid 24.42 20.35
AT4G33490.2 Thale cress endoplasmic reticulum, golgi, vacuole 19.53 19.76
AT1G44130.1 Thale cress vacuole 18.6 19.75
AT1G77480.1 Thale cress golgi, plastid, vacuole 19.3 17.81
AT3G51330.1 Thale cress extracellular, plasma membrane, vacuole 21.63 17.58
AT3G51350.1 Thale cress extracellular, plasma membrane, vacuole 20.7 16.86
AT5G10080.1 Thale cress vacuole 20.0 16.29
AT3G51360.9 Thale cress vacuole 18.84 16.27
AT4G35880.1 Thale cress plasma membrane 19.07 15.65
AT5G43100.1 Thale cress plasma membrane 22.79 15.53
AT3G50050.1 Thale cress plasma membrane, vacuole 22.09 15.03
AT3G51340.1 Thale cress plasma membrane 18.14 14.72
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 17.44 14.62
AT1G49050.1 Thale cress cytosol, plastid, vacuole 18.84 13.89
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:823265MEROPS:A01.A41ProteinID:AEE77737.1ArrayExpress:AT3G42550
EnsemblPlantsGene:AT3G42550RefSeq:AT3G42550TAIR:AT3G42550RefSeq:AT3G42550-TAIR-GEnsemblPlants:AT3G42550.1TAIR:AT3G42550.1
InterPro:Aspartic_peptidase_A1Unigene:At.53664UniProt:F4JF07GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787
GO:GO:0019538GO:GO:0030163InterPro:IPR021109InterPro:IPR033121RefSeq:NP_189841.4InterPro:PEPTIDASE_A1
PFAM:PF14541PFAM:PF14543PRINTS:PR00792PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF545
InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630InterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0001A7B08A
Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:F4JF07]
Coordinates
chr3:-:14665728..14669135
Molecular Weight (calculated)
47882.4 Da
IEP (calculated)
6.628
GRAVY (calculated)
0.085
Length
430 amino acids
Sequence
(BLAST)
001: MRQGIMRLII AAIFVMVCGY EATVLPLKRM IPPSHELDLT QLMTFDSARH GRLLQSPVHG SFNWKVERDT SILLSALYYT TVQIGTPPRE LDVVIDTGSD
101: LVWVSCNSCV GCPLHNVTFF DPGASSSAVK LACSDKRCSS DLQKKSRCSL LESCTYKVEY GDGSVTSGYY ISDLISFDTM SDWTYIAFRD NSTWHPWVRQ
201: GAIIGTFPAL CSTPCSTVSS QPLYYNPQFS HMMTVAVNDL RLPIDPSVFS VAKGYGTIID SGTTLVHFPG EAYDPLIQAI LNVVSQYGRP IPYESFQCFN
301: ITSGISSHLV IADMFPEVHL GFAGGASMVI KPEAYLFQKF LDLTNAIWCL GFYSSTSRRI TIIGEVAIRD KMFVYDLDHQ RIGWAEYNCS LDVTRAQQNK
401: DITNTKHSTG NSGKTCSYLA IITYLLHFLF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.