Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 7
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G079700.1 | Wheat | vacuole | 97.65 | 96.89 |
| TraesCS2A01G067500.1 | Wheat | vacuole | 96.86 | 96.3 |
| Os04t0228000-01 | Rice | extracellular, vacuole | 81.18 | 78.11 |
| KXG25917 | Sorghum | vacuole | 78.82 | 77.76 |
| Zm00001d004132_P001 | Maize | extracellular | 78.04 | 76.83 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 29.22 | 48.69 |
| PGSC0003DMT400010765 | Potato | cytosol | 17.65 | 48.39 |
| TraesCS5D01G340300.1 | Wheat | extracellular, plasma membrane, vacuole | 48.24 | 47.31 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 46.47 | 46.2 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 45.49 | 46.12 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 45.69 | 45.51 |
| Bra024490.1-P | Field mustard | vacuole | 45.49 | 45.4 |
| CDY29199 | Canola | vacuole | 45.49 | 45.4 |
| CDY07819 | Canola | vacuole | 45.1 | 45.01 |
| KRH28845 | Soybean | vacuole | 44.51 | 44.69 |
| KRH76603 | Soybean | vacuole | 44.31 | 44.49 |
| Solyc03g033360.1.1 | Tomato | plastid | 33.33 | 43.7 |
| KRH07991 | Soybean | nucleus | 44.12 | 43.6 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 44.9 | 42.49 |
| Solyc02g083460.2.1 | Tomato | extracellular | 44.71 | 42.3 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 25.29 | 41.35 |
| PGSC0003DMT400058018 | Potato | vacuole | 43.92 | 40.95 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 41.96 | 40.45 |
| TraesCS7D01G524300.1 | Wheat | plastid | 41.37 | 40.27 |
| Bra013063.1-P | Field mustard | plasma membrane | 22.75 | 40.0 |
| Bra036814.1-P | Field mustard | vacuole | 37.45 | 39.54 |
| CDX90651 | Canola | plasma membrane | 40.78 | 38.95 |
| CDX73727 | Canola | vacuole | 37.65 | 38.95 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 45.49 | 38.47 |
| CDY29013 | Canola | plasma membrane | 39.8 | 38.02 |
| AT3G51360.9 | Thale cress | vacuole | 37.06 | 37.95 |
| CDX78000 | Canola | vacuole | 37.25 | 37.7 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 39.02 | 37.69 |
| KRH69733 | Soybean | nucleus | 44.31 | 37.54 |
| Bra012857.1-P | Field mustard | plasma membrane | 33.14 | 37.47 |
| Bra036815.1-P | Field mustard | vacuole | 39.41 | 37.08 |
| CDX77999 | Canola | vacuole | 38.82 | 36.94 |
| AT3G51340.1 | Thale cress | plasma membrane | 38.24 | 36.79 |
| CDX73728 | Canola | vacuole | 38.63 | 36.62 |
| TraesCS6D01G282400.2 | Wheat | plasma membrane | 34.71 | 34.5 |
| TraesCS5D01G532900.3 | Wheat | extracellular | 14.12 | 25.09 |
| TraesCS4D01G094200.1 | Wheat | plasma membrane, vacuole | 19.22 | 23.79 |
| TraesCS7D01G390900.1 | Wheat | vacuole | 22.75 | 23.67 |
| TraesCS2D01G273200.1 | Wheat | extracellular, plasma membrane, vacuole | 21.76 | 22.75 |
| TraesCS4D01G100300.1 | Wheat | extracellular, plasma membrane | 18.24 | 22.41 |
| TraesCS4D01G094300.1 | Wheat | plasma membrane, vacuole | 17.25 | 22.34 |
| TraesCS3D01G311700.2 | Wheat | plasma membrane | 21.76 | 22.2 |
| TraesCS4D01G364900.1 | Wheat | unclear | 17.84 | 22.2 |
| TraesCS5D01G128800.1 | Wheat | plasma membrane, vacuole | 19.61 | 22.17 |
| TraesCS4D01G072000.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 18.04 | 21.55 |
| TraesCS4D01G365000.1 | Wheat | plasma membrane, vacuole | 17.25 | 21.46 |
| TraesCS5D01G533000.1 | Wheat | plastid | 18.43 | 20.57 |
| TraesCS4D01G100200.1 | Wheat | extracellular, golgi | 14.9 | 20.16 |
| TraesCS6D01G089100.1 | Wheat | cytosol, peroxisome, vacuole | 11.37 | 19.66 |
| TraesCS6D01G272600.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 20.0 | 18.38 |
| TraesCS7D01G211000.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 17.84 | 18.02 |
| TraesCS2D01G192000.1 | Wheat | plasma membrane, plastid, vacuole | 19.41 | 15.66 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PRINTS:PR00792 |
| ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF556 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 |
| SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | EnsemblPlantsGene:TraesCS2D01G065800 | EnsemblPlants:TraesCS2D01G065800.1 | SEG:seg |
Description
No Description!
Coordinates
chr2D:-:27908168..27912521
Molecular Weight (calculated)
54869.9 Da
IEP (calculated)
6.335
GRAVY (calculated)
-0.036
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTATQLLLP ALLLVAGVAG GAPSLEFHHR FSARVRRWAD ARGHELPGGW PPPGGAAYVA ALAGHDRHRA LSAAGGGGRP PLTFSEGNAT LKVSNLGFLH
101: YALVTVGTPG HTFMVALDTG SDLFWLPCQC DGCTPPPSSA ASAPASFYIP SLSSTSQSVP CNSDFCGLGK ECSTTSSCPY KMVYVSADTS SSGFLVEDVL
201: YLSTEDTHPQ FLKAQIMFGC GEVQTGSFLD AAAPNGLFGL GVDMISVPSI LAQKGLTSNS FSMCFGRDGI GRISFGDQGS SDQEETPLDI NQKHPTYSIT
301: ITGIVVGNNL MDLEVSTIFD TGTSFTYLAD PAYTYITDGF HNQVQANRHA ADSRIPFEYC YDLSSSEARI QTPSISLRTA GGSLFPAIDP GQVISIQQHE
401: YVYCLAIVKS TKLNIIGQNF MTGVRVVFDR ERKILGWKRF NCYDTDSSNP LSINSRNSSR STPENYSPQE TKNPAGASQL RHVSSSPPVV WWHNNSLLLM
501: MFVLLHLLIF
101: YALVTVGTPG HTFMVALDTG SDLFWLPCQC DGCTPPPSSA ASAPASFYIP SLSSTSQSVP CNSDFCGLGK ECSTTSSCPY KMVYVSADTS SSGFLVEDVL
201: YLSTEDTHPQ FLKAQIMFGC GEVQTGSFLD AAAPNGLFGL GVDMISVPSI LAQKGLTSNS FSMCFGRDGI GRISFGDQGS SDQEETPLDI NQKHPTYSIT
301: ITGIVVGNNL MDLEVSTIFD TGTSFTYLAD PAYTYITDGF HNQVQANRHA ADSRIPFEYC YDLSSSEARI QTPSISLRTA GGSLFPAIDP GQVISIQQHE
401: YVYCLAIVKS TKLNIIGQNF MTGVRVVFDR ERKILGWKRF NCYDTDSSNP LSINSRNSSR STPENYSPQE TKNPAGASQL RHVSSSPPVV WWHNNSLLLM
501: MFVLLHLLIF
001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV
Arabidopsis Description
AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.