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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH56393
KRH62532

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17760.1 KRH56393 AT4G26455.1 21798944
AT2G17760.1 KRH62532 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH69733 Soybean nucleus 91.86 78.74
KRH76603 Soybean vacuole 66.28 67.32
KRH28845 Soybean vacuole 65.12 66.14
VIT_00s0510g00050.t01 Wine grape plasma membrane, vacuole 32.17 54.25
CDY07819 Canola vacuole 50.78 51.27
CDY29199 Canola vacuole 50.39 50.88
Bra024490.1-P Field mustard vacuole 50.39 50.88
Bra002086.1-P Field mustard extracellular, plasma membrane, vacuole 49.42 50.7
AT2G17760.1 Thale cress golgi, plasma membrane, vacuole 49.81 50.1
CDY24371 Canola extracellular, plasma membrane, vacuole 49.22 49.61
PGSC0003DMT400010765 Potato cytosol 17.44 48.39
GSMUA_Achr4P05070_001 Banana plasma membrane, vacuole 41.67 47.99
PGSC0003DMT400009406 Potato plasma membrane, vacuole 49.61 47.5
Solyc02g083460.2.1 Tomato extracellular 49.22 47.12
Solyc03g033360.1.1 Tomato plastid 35.08 46.53
PGSC0003DMT400058018 Potato vacuole 47.67 44.97
GSMUA_Achr1P07390_001 Banana extracellular, vacuole 44.19 44.27
TraesCS2D01G065800.1 Wheat vacuole 43.6 44.12
TraesCS2B01G079700.1 Wheat vacuole 43.8 43.97
GSMUA_Achr2P03530_001 Banana plasma membrane 44.38 43.95
TraesCS2A01G067500.1 Wheat vacuole 43.6 43.86
TraesCS5B01G334700.1 Wheat endoplasmic reticulum, extracellular, vacuole 43.8 43.8
KRH69730 Soybean extracellular, plasma membrane, vacuole 44.38 43.7
KRH07987 Soybean endoplasmic reticulum, plasma membrane, vacuole 43.8 43.55
TraesCS5D01G340300.1 Wheat extracellular, plasma membrane, vacuole 43.6 43.27
TraesCS5A01G335500.1 Wheat extracellular, plasma membrane, vacuole 43.41 43.08
GSMUA_Achr1P07410_001 Banana cytosol 11.63 42.86
EER99278 Sorghum extracellular, plasma membrane, vacuole 43.41 42.83
CDY02252 Canola golgi, plasma membrane, vacuole 25.78 42.63
Zm00001d022600_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 42.05 42.55
GSMUA_AchrUn_... Banana plasma membrane, vacuole 37.02 42.54
CDY20815 Canola plasma membrane, plastid, vacuole 49.61 42.45
KXG25917 Sorghum vacuole 42.25 42.17
Os04t0228000-01 Rice extracellular, vacuole 43.22 42.08
Bra013063.1-P Field mustard plasma membrane 23.45 41.72
Os09t0542100-01 Rice plasma membrane 39.53 41.63
Bra036814.1-P Field mustard vacuole 38.95 41.61
Zm00001d004132_P001 Maize extracellular 41.67 41.51
GSMUA_Achr1P07400_001 Banana cytosol, plasma membrane, plastid 12.79 41.25
GSMUA_Achr7P03880_001 Banana extracellular 34.88 40.91
CDX73727 Canola vacuole 38.95 40.77
AT3G51330.1 Thale cress extracellular, plasma membrane, vacuole 41.67 40.64
GSMUA_AchrUn_... Banana vacuole 40.5 40.58
CDX78000 Canola vacuole 39.15 40.08
TraesCS7D01G524300.1 Wheat plastid 40.7 40.08
HORVU5Hr1G084490.1 Barley vacuole 43.02 40.07
Zm00001d014804_P001 Maize extracellular 42.05 39.96
HORVU7Hr1G118020.3 Barley extracellular, plasma membrane, vacuole 41.47 39.85
Os06t0717900-02 Rice extracellular 42.25 39.56
TraesCS7A01G537200.1 Wheat plasma membrane 40.89 39.44
AT3G51360.9 Thale cress vacuole 37.98 39.36
CDX90651 Canola plasma membrane 40.7 39.33
CDY29013 Canola plasma membrane 40.12 38.76
CDX77999 Canola vacuole 40.12 38.62
Bra036815.1-P Field mustard vacuole 40.5 38.56
CDX73728 Canola vacuole 40.12 38.48
EER88970 Sorghum vacuole 40.31 38.45
Bra012857.1-P Field mustard plasma membrane 33.53 38.36
AT3G51350.1 Thale cress extracellular, plasma membrane, vacuole 38.95 38.07
AT3G51340.1 Thale cress plasma membrane 37.6 36.6
Zm00001d036037_P001 Maize vacuole 40.5 36.28
EER89124 Sorghum extracellular, vacuole 39.53 35.48
KRG97610 Soybean golgi, plasma membrane, vacuole 32.75 32.5
KRH31262 Soybean extracellular, vacuole 31.98 31.67
KRH16653 Soybean plasma membrane 31.01 30.3
KRH18849 Soybean plasma membrane, vacuole 30.81 30.06
KRH32611 Soybean cytosol 9.3 25.26
KRH64665 Soybean vacuole 18.22 24.54
KRH17969 Soybean vacuole 16.09 23.71
KRH00937 Soybean plasma membrane 21.71 23.28
KRH53249 Soybean vacuole 18.99 23.28
KRH64664 Soybean vacuole 18.8 23.04
KRH63975 Soybean vacuole 19.38 22.73
KRH53961 Soybean vacuole 19.19 22.6
KRH40286 Soybean golgi, plasma membrane, vacuole 21.51 22.38
KRH40970 Soybean nucleus 18.41 22.04
KRH25141 Soybean extracellular, plasma membrane, vacuole 21.12 22.02
KRH67797 Soybean extracellular, plasma membrane, vacuole 21.12 21.76
KRH34227 Soybean plasma membrane 19.96 21.68
KRH30533 Soybean extracellular 20.54 21.68
KRG96085 Soybean extracellular, plasma membrane, vacuole 20.93 21.51
KRH26553 Soybean extracellular, plasma membrane, vacuole 20.54 21.5
KRH16379 Soybean plasma membrane, vacuole 18.8 21.46
KRH59619 Soybean nucleus 17.83 21.35
KRG92565 Soybean cytosol 11.82 21.18
KRH22758 Soybean extracellular, plasma membrane, vacuole 19.96 21.02
KRH19985 Soybean extracellular, plasma membrane, vacuole 19.57 20.78
KRH01533 Soybean mitochondrion, plasma membrane, vacuole 19.38 20.41
KRH45218 Soybean plasma membrane, vacuole 19.19 20.29
KRH39216 Soybean nucleus, peroxisome, vacuole 20.74 18.71
KRH48461 Soybean nucleus, peroxisome, vacuole 20.35 18.29
KRH04490 Soybean vacuole 19.19 15.62
KRH77066 Soybean endoplasmic reticulum, plasma membrane 18.6 14.88
KRH32612 Soybean cytosol, extracellular 6.2 14.61
KRH58031 Soybean plastid 19.38 14.6
KRH28412 Soybean plasma membrane 17.83 14.2
Protein Annotations
EntrezGene:100784113MapMan:19.4.3.1Gene3D:2.40.70.10MEROPS:A01.A38EMBL:ACUP02010134InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_ASEnsemblPlantsGene:GLYMA_16G122700GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787GO:GO:0019538
GO:GO:0030163UniProt:I1MN14InterPro:IPR021109InterPro:IPR033121EnsemblPlants:KRH07991ProteinID:KRH07991
ProteinID:KRH07991.1InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792ScanProsite:PS00141
PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF546InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTM
InterPro:TAXi_CInterPro:TAXi_NUniParc:UPI000233B797SEG:seg::
Description
hypothetical protein
Coordinates
chr16:+:27176269..27181726
Molecular Weight (calculated)
56452.7 Da
IEP (calculated)
5.832
GRAVY (calculated)
-0.131
Length
516 amino acids
Sequence
(BLAST)
001: MACTEHGHGS VLLGLVLLSL AASQSCCYGL STFGFDIHHR FSDQIKGMLG IDDVPQKGTP QYYAVMAHRD RVFRGRRLAG ADHHSPLTFA AGNDTHQIAS
101: SGFLHFANVS VGTPPLWFLV ALDTGSDLFW LPCDCISCVH GGLRTRTGKI LKFNTYDLDK SSTSNEVSCN NSTFCRQRQQ CPSAGSTCRY QVDYLSNDTS
201: SRGFVVEDVL HLITDDDQTK DADTRIAFGC GQVQTGVFLN GAAPNGLFGL GMDNISVPSI LAREGLISNS FSMCFGSDSA GRITFGDTGS PDQRKTPFNV
301: RKLHPTYNIT ITKIIVEDSV ADLEFHAIFD SGTSFTYIND PAYTRIGEMY NSKVKAKRHS SQSPDSNIPF DYCYDISISQ TIEVPFLNLT MKGGDDYYVM
401: DPIIQVSSEE EGDLLCLGIQ KSDSVNIIGQ NFMTGYKIVF DRDNMNLGWK ETNCSDDVLS NTSPINTPSH SPAVSPAIAV NPVARSNPSI NPPNRSFMIK
501: PTFTFVVVLL PLIAIF
Best Arabidopsis Sequence Match ( AT2G17760.1 )
(BLAST)
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.