Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr3P04120_001 | |
| GSMUA_Achr4P01630_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17760.1 | GSMUA_Achr10P... | AT4G26455.1 | 21798944 |
| AT2G17760.1 | GSMUA_Achr3P04120_001 | AT4G26455.1 | 21798944 |
| AT2G17760.1 | GSMUA_Achr4P01630_001 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P05070_001 | Banana | plasma membrane, vacuole | 59.38 | 21.21 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 40.0 | 20.51 |
| GSMUA_Achr1P07390_001 | Banana | extracellular, vacuole | 65.0 | 20.19 |
| GSMUA_Achr2P03530_001 | Banana | plasma membrane | 63.75 | 19.58 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 53.12 | 18.93 |
| Bra013063.1-P | Field mustard | plasma membrane | 32.5 | 17.93 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 43.12 | 15.68 |
| KRH76603 | Soybean | vacuole | 45.0 | 14.17 |
| KRH28845 | Soybean | vacuole | 45.0 | 14.17 |
| PGSC0003DMT400058018 | Potato | vacuole | 47.5 | 13.89 |
| Solyc02g083460.2.1 | Tomato | extracellular | 46.25 | 13.73 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 46.25 | 13.73 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 43.12 | 13.72 |
| Bra024490.1-P | Field mustard | vacuole | 43.75 | 13.7 |
| CDY29199 | Canola | vacuole | 43.75 | 13.7 |
| GSMUA_AchrUn_... | Banana | vacuole | 43.75 | 13.59 |
| CDY07819 | Canola | vacuole | 43.12 | 13.5 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 43.12 | 13.48 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 44.38 | 13.42 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 42.5 | 13.26 |
| CDY29013 | Canola | plasma membrane | 43.75 | 13.11 |
| CDX90651 | Canola | plasma membrane | 43.75 | 13.11 |
| AT3G51360.9 | Thale cress | vacuole | 40.0 | 12.85 |
| KRH07991 | Soybean | nucleus | 41.25 | 12.79 |
| CDX73727 | Canola | vacuole | 38.75 | 12.58 |
| Bra036814.1-P | Field mustard | vacuole | 37.5 | 12.42 |
| AT3G51340.1 | Thale cress | plasma membrane | 40.62 | 12.26 |
| GSMUA_Achr10P... | Banana | plasma membrane, vacuole | 40.62 | 12.24 |
| CDX77999 | Canola | vacuole | 40.62 | 12.13 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 40.0 | 12.12 |
| CDX78000 | Canola | vacuole | 38.12 | 12.1 |
| CDX73728 | Canola | vacuole | 40.62 | 12.08 |
| Bra036815.1-P | Field mustard | vacuole | 40.62 | 11.99 |
| GSMUA_Achr5P22890_001 | Banana | endoplasmic reticulum, plasma membrane | 38.75 | 11.95 |
| Solyc03g033360.1.1 | Tomato | plastid | 28.12 | 11.57 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 42.5 | 11.28 |
| KRH69733 | Soybean | nucleus | 41.25 | 10.96 |
| GSMUA_Achr2P17680_001 | Banana | vacuole | 32.5 | 10.42 |
| GSMUA_Achr8P15150_001 | Banana | extracellular, plasma membrane, vacuole | 30.0 | 9.41 |
| GSMUA_Achr6P29770_001 | Banana | extracellular, plasma membrane, vacuole | 29.38 | 9.38 |
| GSMUA_Achr6P27900_001 | Banana | golgi, vacuole | 28.12 | 9.3 |
| GSMUA_Achr3P17250_001 | Banana | plasma membrane, vacuole | 26.88 | 8.87 |
| GSMUA_Achr3P19030_001 | Banana | vacuole | 23.12 | 8.85 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 21.88 | 8.08 |
| GSMUA_Achr6P17740_001 | Banana | extracellular | 22.5 | 7.96 |
| Bra012857.1-P | Field mustard | plasma membrane | 21.25 | 7.54 |
| GSMUA_Achr6P30620_001 | Banana | cytosol, nucleus, vacuole | 25.0 | 7.34 |
| GSMUA_Achr4P07210_001 | Banana | cytosol, plastid, vacuole | 23.12 | 6.61 |
| GSMUA_Achr4P14240_001 | Banana | cytosol, peroxisome, plastid | 23.12 | 6.58 |
| GSMUA_Achr3P18830_001 | Banana | cytosol | 21.25 | 5.94 |
| PGSC0003DMT400010765 | Potato | cytosol | 3.75 | 3.23 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 4.38 | 2.29 |
| GSMUA_Achr1P07410_001 | Banana | cytosol | 1.88 | 2.14 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr1G07400_001 |
| EnsemblPlants:GSMUA_Achr1P07400_001 | EnsemblPlants:GSMUA_Achr1T07400_001 | InterPro:IPR021109 | InterPro:IPR033121 | UniProt:M0RXU8 | InterPro:PEPTIDASE_A1 |
| PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF407 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 |
| InterPro:TAXi_N | UniParc:UPI000296C910 | : | : | : | : |
Description
Aspartic proteinase nepenthesin II-like [Source:GMGC_GENE;Acc:GSMUA_Achr1G07400_001]
Coordinates
chr1:+:5787977..5789031
Molecular Weight (calculated)
17749.8 Da
IEP (calculated)
3.961
GRAVY (calculated)
-0.056
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPTCSAPWD CKPSPPPLGF MDLGLPYAFL KLGTPNVTFL VALDAGSDLF WVPCDCHQCA VAKFDQQNFE FDIYSTSNSS TSQKITCNNS LCDNQNACTA
101: ETSSCPYIVQ YLSANTSTSG VLVEDVPYLM TEDETPRIVE APIVFGYVAF NYYNHLRLEW
101: ETSSCPYIVQ YLSANTSTSG VLVEDVPYLM TEDETPRIVE APIVFGYVAF NYYNHLRLEW
001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGRKIS FSSYQSWNIR
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGRKIS FSSYQSWNIR
Arabidopsis Description
AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.