Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g066170.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17760.1 | Solyc07g066170.2.1 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 95.36 | 95.36 |
| PGSC0003DMT400010765 | Potato | cytosol | 27.09 | 78.49 |
| Solyc03g033360.1.1 | Tomato | plastid | 50.46 | 69.92 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 32.84 | 57.84 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 49.54 | 53.08 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 50.28 | 52.83 |
| CDY29199 | Canola | vacuole | 49.54 | 52.25 |
| Bra024490.1-P | Field mustard | vacuole | 49.54 | 52.25 |
| KRH76603 | Soybean | vacuole | 49.17 | 52.17 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 49.54 | 52.15 |
| CDY07819 | Canola | vacuole | 49.17 | 51.86 |
| KRH28845 | Soybean | vacuole | 48.24 | 51.18 |
| GSMUA_Achr4P05070_001 | Banana | plasma membrane, vacuole | 42.12 | 50.67 |
| KRH07991 | Soybean | nucleus | 47.12 | 49.22 |
| GSMUA_Achr2P03530_001 | Banana | plasma membrane | 45.08 | 46.64 |
| GSMUA_Achr1P07400_001 | Banana | cytosol, plasma membrane, plastid | 13.73 | 46.25 |
| GSMUA_Achr1P07390_001 | Banana | extracellular, vacuole | 43.78 | 45.83 |
| GSMUA_Achr1P07410_001 | Banana | cytosol | 11.87 | 45.71 |
| Solyc02g083450.2.1 | Tomato | vacuole | 44.16 | 45.68 |
| Zm00001d022600_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 43.04 | 45.49 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 37.48 | 44.99 |
| TraesCS2D01G065800.1 | Wheat | vacuole | 42.3 | 44.71 |
| KXG25917 | Sorghum | vacuole | 42.86 | 44.68 |
| TraesCS2A01G067500.1 | Wheat | vacuole | 42.49 | 44.64 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 49.72 | 44.44 |
| TraesCS5B01G334700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 42.49 | 44.38 |
| EER99278 | Sorghum | extracellular, plasma membrane, vacuole | 43.04 | 44.36 |
| TraesCS2B01G079700.1 | Wheat | vacuole | 42.3 | 44.36 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 25.6 | 44.23 |
| Os09t0542100-01 | Rice | plasma membrane | 40.07 | 44.08 |
| TraesCS5A01G335500.1 | Wheat | extracellular, plasma membrane, vacuole | 42.49 | 44.04 |
| Zm00001d004132_P001 | Maize | extracellular | 42.12 | 43.82 |
| Bra036814.1-P | Field mustard | vacuole | 39.15 | 43.69 |
| TraesCS5D01G340300.1 | Wheat | extracellular, plasma membrane, vacuole | 42.12 | 43.65 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 35.62 | 43.64 |
| Os04t0228000-01 | Rice | extracellular, vacuole | 42.49 | 43.21 |
| KRH69733 | Soybean | nucleus | 47.87 | 42.86 |
| CDX73727 | Canola | vacuole | 39.15 | 42.8 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 41.93 | 42.72 |
| Bra013063.1-P | Field mustard | plasma membrane | 22.63 | 42.07 |
| CDX78000 | Canola | vacuole | 39.33 | 42.06 |
| AT3G51360.9 | Thale cress | vacuole | 38.59 | 41.77 |
| EER88970 | Sorghum | vacuole | 41.74 | 41.59 |
| CDX90651 | Canola | plasma membrane | 40.82 | 41.2 |
| CDY29013 | Canola | plasma membrane | 40.63 | 41.01 |
| HORVU5Hr1G084490.1 | Barley | vacuole | 42.12 | 40.97 |
| GSMUA_AchrUn_... | Banana | vacuole | 39.15 | 40.97 |
| TraesCS7D01G524300.1 | Wheat | plastid | 39.7 | 40.84 |
| Zm00001d014804_P001 | Maize | extracellular | 41.0 | 40.7 |
| Os06t0717900-02 | Rice | extracellular | 41.37 | 40.47 |
| HORVU7Hr1G118020.3 | Barley | extracellular, plasma membrane, vacuole | 40.26 | 40.41 |
| TraesCS7A01G537200.1 | Wheat | plasma membrane | 40.07 | 40.37 |
| Bra012857.1-P | Field mustard | plasma membrane | 33.77 | 40.35 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 38.59 | 39.39 |
| CDX73728 | Canola | vacuole | 39.15 | 39.22 |
| CDX77999 | Canola | vacuole | 38.59 | 38.81 |
| Bra036815.1-P | Field mustard | vacuole | 38.78 | 38.56 |
| AT3G51340.1 | Thale cress | plasma membrane | 37.29 | 37.92 |
| Zm00001d036037_P001 | Maize | vacuole | 40.07 | 37.5 |
| EER89124 | Sorghum | extracellular, vacuole | 39.7 | 37.22 |
| Solyc04g054490.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 34.51 | 34.64 |
| Solyc04g072690.2.1 | Tomato | plasma membrane | 29.68 | 30.3 |
| Solyc01g011220.1.1 | Tomato | cytosol | 11.13 | 27.27 |
| Solyc01g011300.1.1 | Tomato | cytosol | 5.75 | 26.27 |
| Solyc06g018100.2.1 | Tomato | extracellular, plasma membrane | 19.48 | 24.59 |
| Solyc06g009090.1.1 | Tomato | extracellular, vacuole | 9.46 | 24.06 |
| Solyc06g009080.1.1 | Tomato | cytosol | 4.82 | 23.64 |
| Solyc01g011330.1.1 | Tomato | plastid | 7.79 | 23.46 |
| Solyc11g066620.1.1 | Tomato | extracellular | 21.71 | 23.45 |
| Solyc04g056590.2.1 | Tomato | golgi, plasma membrane, vacuole | 20.96 | 23.4 |
| Solyc06g009110.2.1 | Tomato | extracellular | 18.18 | 23.33 |
| Solyc05g055800.2.1 | Tomato | extracellular, vacuole | 20.22 | 22.85 |
| Solyc03g058400.2.1 | Tomato | vacuole | 19.48 | 21.97 |
| Solyc09g098340.2.1 | Tomato | extracellular | 19.48 | 21.74 |
| Solyc09g008600.2.1 | Tomato | extracellular, plasma membrane, vacuole | 20.04 | 21.6 |
| Solyc06g060130.2.1 | Tomato | extracellular | 17.63 | 21.54 |
| Solyc05g053900.2.1 | Tomato | golgi, vacuole | 17.63 | 19.87 |
| Solyc10g085760.1.1 | Tomato | cytosol, mitochondrion, plastid | 9.46 | 19.17 |
| Solyc06g069190.2.1 | Tomato | cytosol, nucleus, vacuole | 18.18 | 17.44 |
| Solyc08g029230.2.1 | Tomato | plasma membrane | 20.22 | 16.57 |
| Solyc01g098710.2.1 | Tomato | plasma membrane, vacuole | 19.3 | 15.98 |
| Solyc10g044740.1.1 | Tomato | plastid | 18.74 | 15.83 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0005575 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
| InterPro:IPR021109 | InterPro:IPR033121 | UniProt:K4BAL4 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 |
| PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF232 | InterPro:Pepsin-like_plant |
| InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g083460.2 | EnsemblPlants:Solyc02g083460.2.1 | InterPro:TAXi_C |
| InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI00027684CD | : | : | : |
Description
No Description!
Coordinates
chr2:+:46858591..46862612
Molecular Weight (calculated)
58096.7 Da
IEP (calculated)
5.615
GRAVY (calculated)
-0.085
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNSGKIRNF FLAPIIFLAI LGYQLKTTDG FGTFGFDIHH RYSDPVKGIL DLHGLPEKGT VEYYSAWTQR DRFVKGRRLA DTTNPTVPLA FSGGNETLRL
101: SSLGFLHYAN VTVGSPGLSF LVALDTGSDL FWLPCDCSNC VRALQTRSGG RINLNIYSPN TSSTSEIVPC NGTLCGQNRR CLASQNACAY GVAYLSNNTS
201: SSGVLVEDIL HLETNNAQQK SIEAPIALGC GIRQTGAFLT GAAPNGLFGL GIENISVPSM LASKGLAANS FSMCFGPDGI GRIVFGDKGS PGQGETPLNL
301: DQPHPTYNIS LTGITVGSKI TDLDFTAIFD SGTSFTYLND PVYKVITENF DSEAKQPRIQ PDGTIPFEYC YGISANQTTF EVPDVNLTMK GGNQFYLFDP
401: IIMLSLPDGS GAYCLAVVKS GDVNIIGQNF MTGYHVIFDR EKMVLGWKAS DCYDSGESND RSTTLPVNKR NSTEAPSPAS VVPEATKGNA SANEPATSFP
501: SVPSSRPAGN HAPHLNSFYY QLMMAIFSFF NYYLIIISS
101: SSLGFLHYAN VTVGSPGLSF LVALDTGSDL FWLPCDCSNC VRALQTRSGG RINLNIYSPN TSSTSEIVPC NGTLCGQNRR CLASQNACAY GVAYLSNNTS
201: SSGVLVEDIL HLETNNAQQK SIEAPIALGC GIRQTGAFLT GAAPNGLFGL GIENISVPSM LASKGLAANS FSMCFGPDGI GRIVFGDKGS PGQGETPLNL
301: DQPHPTYNIS LTGITVGSKI TDLDFTAIFD SGTSFTYLND PVYKVITENF DSEAKQPRIQ PDGTIPFEYC YGISANQTTF EVPDVNLTMK GGNQFYLFDP
401: IIMLSLPDGS GAYCLAVVKS GDVNIIGQNF MTGYHVIFDR EKMVLGWKAS DCYDSGESND RSTTLPVNKR NSTEAPSPAS VVPEATKGNA SANEPATSFP
501: SVPSSRPAGN HAPHLNSFYY QLMMAIFSFF NYYLIIISS
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.