Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G340300.1 | Wheat | extracellular, plasma membrane, vacuole | 98.45 | 97.69 |
| TraesCS5A01G335500.1 | Wheat | extracellular, plasma membrane, vacuole | 95.93 | 95.19 |
| HORVU5Hr1G084490.1 | Barley | vacuole | 93.8 | 87.36 |
| EER99278 | Sorghum | extracellular, plasma membrane, vacuole | 76.55 | 75.53 |
| Zm00001d022600_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 72.87 | 73.73 |
| Os09t0542100-01 | Rice | plasma membrane | 65.31 | 68.78 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 44.77 | 51.45 |
| GSMUA_Achr7P03880_001 | Banana | extracellular | 41.86 | 49.09 |
| TraesCS2B01G079700.1 | Wheat | vacuole | 48.64 | 48.83 |
| GSMUA_AchrUn_... | Banana | vacuole | 48.64 | 48.74 |
| PGSC0003DMT400010765 | Potato | cytosol | 17.44 | 48.39 |
| VIT_00s0510g00050.t01 | Wine grape | plasma membrane, vacuole | 27.71 | 46.73 |
| Bra002086.1-P | Field mustard | extracellular, plasma membrane, vacuole | 44.57 | 45.73 |
| CDY07819 | Canola | vacuole | 45.16 | 45.6 |
| Bra024490.1-P | Field mustard | vacuole | 44.96 | 45.4 |
| CDY29199 | Canola | vacuole | 44.96 | 45.4 |
| AT2G17760.1 | Thale cress | golgi, plasma membrane, vacuole | 44.96 | 45.22 |
| CDY24371 | Canola | extracellular, plasma membrane, vacuole | 44.77 | 45.12 |
| KRH28845 | Soybean | vacuole | 43.6 | 44.29 |
| KRH76603 | Soybean | vacuole | 43.41 | 44.09 |
| KRH07991 | Soybean | nucleus | 43.8 | 43.8 |
| Solyc03g033360.1.1 | Tomato | plastid | 32.95 | 43.7 |
| Solyc02g083460.2.1 | Tomato | extracellular | 44.38 | 42.49 |
| PGSC0003DMT400009406 | Potato | plasma membrane, vacuole | 43.6 | 41.74 |
| PGSC0003DMT400058018 | Potato | vacuole | 42.64 | 40.22 |
| Bra013063.1-P | Field mustard | plasma membrane | 22.48 | 40.0 |
| CDY02252 | Canola | golgi, plasma membrane, vacuole | 24.03 | 39.74 |
| Bra036814.1-P | Field mustard | vacuole | 36.63 | 39.13 |
| AT3G51330.1 | Thale cress | extracellular, plasma membrane, vacuole | 39.92 | 38.94 |
| CDX90651 | Canola | plasma membrane | 40.12 | 38.76 |
| AT3G51360.9 | Thale cress | vacuole | 37.21 | 38.55 |
| CDX73727 | Canola | vacuole | 36.82 | 38.54 |
| CDY20815 | Canola | plasma membrane, plastid, vacuole | 44.96 | 38.47 |
| CDY29013 | Canola | plasma membrane | 39.73 | 38.39 |
| TraesCS6B01G332100.2 | Wheat | plasma membrane | 37.98 | 38.06 |
| CDX78000 | Canola | vacuole | 37.02 | 37.9 |
| KRH69733 | Soybean | nucleus | 43.99 | 37.71 |
| Bra012857.1-P | Field mustard | plasma membrane | 32.56 | 37.25 |
| CDX73728 | Canola | vacuole | 38.57 | 36.99 |
| CDX77999 | Canola | vacuole | 38.37 | 36.94 |
| Bra036815.1-P | Field mustard | vacuole | 38.57 | 36.72 |
| AT3G51340.1 | Thale cress | plasma membrane | 37.02 | 36.04 |
| AT3G51350.1 | Thale cress | extracellular, plasma membrane, vacuole | 36.43 | 35.61 |
| TraesCS2B01G291900.1 | Wheat | extracellular, plasma membrane, vacuole | 23.84 | 25.2 |
| TraesCS7B01G475600.1 | Wheat | vacuole | 20.16 | 24.76 |
| TraesCS4B01G098000.1 | Wheat | plasma membrane, vacuole | 19.57 | 24.51 |
| TraesCS4B01G098100.1 | Wheat | plasma membrane, vacuole | 18.6 | 24.3 |
| TraesCS4B01G103200.1 | Wheat | golgi, plasma membrane | 18.99 | 24.2 |
| TraesCS7B01G297200.2 | Wheat | plasma membrane, vacuole | 23.26 | 24.19 |
| TraesCS5B01G038800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 18.6 | 23.41 |
| TraesCS6B01G122100.1 | Wheat | plasma membrane | 18.41 | 23.17 |
| TraesCS4B01G372300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 17.25 | 23.12 |
| TraesCS5B01G119900.1 | Wheat | plasma membrane, vacuole | 19.77 | 22.62 |
| TraesCS4B01G103400.1 | Wheat | golgi, plasma membrane | 18.6 | 22.59 |
| TraesCS3B01G346500.2 | Wheat | plasma membrane | 22.09 | 22.44 |
| TraesCS7B01G382700.1 | Wheat | vacuole | 20.16 | 22.08 |
| TraesCS3B01G145900.1 | Wheat | plastid | 17.25 | 20.14 |
| TraesCS3B01G145600.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 16.86 | 19.68 |
| TraesCS6B01G321200.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 19.38 | 17.99 |
| TraesCS7B01G115900.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 17.44 | 17.72 |
| TraesCS2B01G210700.2 | Wheat | plasma membrane | 19.77 | 16.14 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PRINTS:PR00792 |
| ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF407 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 |
| SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | EnsemblPlantsGene:TraesCS5B01G334700 | EnsemblPlants:TraesCS5B01G334700.1 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:517865518..517869284
Molecular Weight (calculated)
54219.2 Da
IEP (calculated)
7.006
GRAVY (calculated)
0.016
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAARALLL LALVAAGAEA LSLDVHHRYS ATVRGWAGLR TGPAPGTAEY YAALAGHDDL RRRSLSLAAA PAPGGGPFAF ADGNDTYRLN AFGFLHYAVV
101: ALGTPNVTFL VALDTGSDLF WVPCDCLKCA PLSSPEYGNL KFDVYSPRKS STSRKVPCSS SLCDLQTECN SAASKSCPYS IEYLSDNTSS NGVLVEDVLY
201: LATESGKSKI TQAPITFGCG QVQTGSFLGS AAPNGLLGLG MDSKSVPSLL ASQGVAANSF SMCFGEDGHG RINFGDTGSA DQLETPLNIY KHNPYYNISI
301: IGAMAGGKTF STKFSAVVDS GTSFTALSDP MYTEITSAFD KQVKEKRNQA DSSLPFEYCY TISAKGALSH PNISLTAKGG SIFPVNDPII TITDISSSPV
401: GYCLAIMKSE GVNLIGENFM SGLKVVFDRE RLVLGWKSFN CYSVDHSSKL PVSPNPSAVP PKPASGPGSS NPEAAKRPSP NITQIDVAKP SSGSSVHLHF
501: SRTFFAAISP LLLAIL
101: ALGTPNVTFL VALDTGSDLF WVPCDCLKCA PLSSPEYGNL KFDVYSPRKS STSRKVPCSS SLCDLQTECN SAASKSCPYS IEYLSDNTSS NGVLVEDVLY
201: LATESGKSKI TQAPITFGCG QVQTGSFLGS AAPNGLLGLG MDSKSVPSLL ASQGVAANSF SMCFGEDGHG RINFGDTGSA DQLETPLNIY KHNPYYNISI
301: IGAMAGGKTF STKFSAVVDS GTSFTALSDP MYTEITSAFD KQVKEKRNQA DSSLPFEYCY TISAKGALSH PNISLTAKGG SIFPVNDPII TITDISSSPV
401: GYCLAIMKSE GVNLIGENFM SGLKVVFDRE RLVLGWKSFN CYSVDHSSKL PVSPNPSAVP PKPASGPGSS NPEAAKRPSP NITQIDVAKP SSGSSVHLHF
501: SRTFFAAISP LLLAIL
001: MVWYSSCRIL FLGLLILLAS SWVLDRCEGF GEFGFEFHHR FSDQVVGVLP GDGLPNRDSS KYYRVMAHRD RLIRGRRLAN EDQSLVTFSD GNETVRVDAL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
101: GFLHYANVTV GTPSDWFMVA LDTGSDLFWL PCDCTNCVRE LKAPGGSSLD LNIYSPNASS TSTKVPCNST LCTRGDRCAS PESDCPYQIR YLSNGTSSTG
201: VLVEDVLHLV SNDKSSKAIP ARVTFGCGQV QTGVFHDGAA PNGLFGLGLE DISVPSVLAK EGIAANSFSM CFGNDGAGRI SFGDKGSVDQ RETPLNIRQP
301: HPTYNITVTK ISVGGNTGDL EFDAVFDSGT SFTYLTDAAY TLISESFNSL ALDKRYQTTD SELPFEYCYA LSPNKDSFQY PAVNLTMKGG SSYPVYHPLV
401: VIPMKDTDVY CLAIMKIEDI SIIGQNFMTG YRVVFDREKL ILGWKESDCY TGETSARTLP SNRSSSSARP PASSFDPEAT NIPSQRPNTS TTSAAYSLSI
501: SLSLFFFSIL AIL
Arabidopsis Description
APF1Aspartyl protease family protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYV9]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.